RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 CCDC167Q9P0B6 97 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 CDH9Q9ULB4 789 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 ANKRD6Q9Y2G4 727 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 IPPQ9Y573 584 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 BTN3A1O00481 513 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 MRASO14807 208 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 SNX3O60493 162 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 RASSF9O75901 435 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 ATP6V1G2O95670 118 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 FCGR1AP12314 374 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 POU1F1P28069 291 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 SNX30Q5VWJ9 437 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 SNX32Q86XE0 403 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 OR56A4Q8NGH8 313 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 PIWIL2Q8TC59 973 aaKnown RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 C18orf25Q96B23 403 aaPredicted RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 SIKE1Q9BRV8 207 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 SH3BP4Q9P0V3 963 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 UXTQ9UBK9 157 aaPredicted RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 STXBP5LQ9Y2K9 1186 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 IFRD1O00458 451 aaPredicted RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 PCDH8O95206 1070 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 IGSF6O95976 241 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 ITGAVP06756 1048 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 PCNAP12004 261 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 ME2P23368 584 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 FASP25445 335 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 ADRM1Q16186 407 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 HSDL1Q3SXM5 330 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 PCID2Q5JVF3 399 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 ARMC12Q5T9G4 340 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 TRMT11Q7Z4G4 463 aaKnown RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 C12orf29Q8N999 325 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 BTN2A2Q8WVV5 523 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 KREMEN1Q96MU8 473 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 SEPHS2Q99611 448 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 RNF208Q9H0X6 261 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 ERVK-5Q9HDB9 667 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 SAR1AQ9NR31 198 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 TMEM59LQ9UK28 342 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 FAM50BQ9Y247 325 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 ACTL7BQ9Y614 415 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 hCG_1818297A0A087WSY0 165 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 INPP4BO15327 924 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 ERCC2P18074 760 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 ARF4P18085 180 aaPredicted RBP11.69□□□□□ -0.54
NOD1-201ENST00000222823 SLC16A1P53985 500 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 VAC14Q08AM6 782 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 TRAF2Q12933 501 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 PABPC1LQ4VXU2 614 aaKnown RBP11.69□□□□□ -0.54
NOD1-201ENST00000222823 C11orf74Q86VG3 221 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 LRRC52Q8N7C0 313 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 ATG16L2Q8NAA4 619 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 CERS2Q96G23 380 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 PCDHB18PQ96TA0 734 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 ZNF670Q9BS34 389 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 TMEM245Q9H330 911 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 MIEF1Q9NQG6 463 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 COG5Q9UP83 839 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
NOD1-201ENST00000222823 MYH10P35580 1976 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 NAV1Q8NEY1 1877 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 IRS2Q9Y4H2 1338 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 PDZK1P1A8MUH7 402 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 CABYRO75952 493 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 CLPTM1O96005 669 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 IFNA14P01570 189 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 ATP4AP20648 1035 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 CYP2A7P20853 494 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 RRM2P31350 389 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 RANBP1P43487 201 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 TAS2R40P59535 323 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 MSLNQ13421 630 aaPredicted RBP11.69□□□□□ -0.54
NOD1-201ENST00000222823 TCHHL1Q5QJ38 904 aaPredicted RBP11.69□□□□□ -0.54
NOD1-201ENST00000222823 GPR141Q7Z602 305 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 PALB2Q86YC2 1186 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 ZNF614Q8N883 585 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 TRPM4Q8TD43 1214 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 PANX3Q96QZ0 392 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 AJAP1Q9UKB5 411 aaPredicted RBP11.69□□□□□ -0.54
NOD1-201ENST00000222823 TRIM17Q9Y577 477 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 NHSL1Q5SYE7 1610 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 DEFA1P59665 94 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 DEFA3P59666 94 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 MAP2K5Q13163 448 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 MILR1Q7Z6M3 343 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 CAMKK2Q96RR4 588 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 CDRT15Q96T59 188 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 KCTD14Q9BQ13 255 aaPredicted RBP11.69□□□□□ -0.54
NOD1-201ENST00000222823 C2orf49Q9BVC5 232 aaPredicted RBP11.69□□□□□ -0.54
NOD1-201ENST00000222823 ZCCHC2Q9C0B9 1178 aaKnown RBP11.69□□□□□ -0.54
NOD1-201ENST00000222823 MYLK2Q9H1R3 596 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 PADI4Q9UM07 663 aa11.69□□□□□ -0.54
NOD1-201ENST00000222823 KPNA3O00505 521 aaPredicted RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 STAU1O95793 577 aaKnown RBP11.68□□□□□ -0.54
NOD1-201ENST00000222823 CCNE2O96020 404 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 PROCP04070 461 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 IMPDH2P12268 514 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 NFKB1P19838 968 aa11.68□□□□□ -0.54
NOD1-201ENST00000222823 FMO4P31512 558 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms