RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 SLC1A6P48664 564 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 UBAP2LQ14157 1087 aaKnown RBP22.66■■□□□ 1.22
CCDC9-201ENST00000221922 C6orf163Q5TEZ5 329 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 C16orf46Q6P387 395 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 TMEM154Q6P9G4 183 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 RASSF3Q86WH2 238 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 TP53INP2Q8IXH6 220 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 DMAP1Q9NPF5 467 aaPredicted RBP22.66■■□□□ 1.22
CCDC9-201ENST00000221922 BFARQ9NZS9 450 aa22.66■■□□□ 1.22
CCDC9-201ENST00000221922 PTPRDP23468 1912 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 I6L893 689 aaPredicted RBP22.65■■□□□ 1.22
CCDC9-201ENST00000221922 GARSP41250 739 aaKnown RBP22.65■■□□□ 1.22
CCDC9-201ENST00000221922 TUBP50607 506 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 CCNHP51946 323 aaPredicted RBP22.65■■□□□ 1.22
CCDC9-201ENST00000221922 ACLYP53396 1101 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 IRX4P78413 519 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 GALNT2Q10471 571 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 NOGQ13253 232 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 FRG1Q14331 258 aaKnown RBP22.65■■□□□ 1.22
CCDC9-201ENST00000221922 MAPRE1Q15691 268 aaKnown RBP22.65■■□□□ 1.22
CCDC9-201ENST00000221922 INSCQ1MX18 579 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 PAN2Q504Q3 1202 aaKnown RBP22.65■■□□□ 1.22
CCDC9-201ENST00000221922 DCLRE1AQ6PJP8 1040 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 CERS2Q96G23 380 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 SUSD3Q96L08 255 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 ZNF184Q99676 751 aaPredicted RBP22.65■■□□□ 1.22
CCDC9-201ENST00000221922 LBHD1Q9BQE6 289 aaPredicted RBP22.65■■□□□ 1.22
CCDC9-201ENST00000221922 RHOBTB2Q9BYZ6 727 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 GBA3Q9H227 469 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 GPAMQ9HCL2 828 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 PIH1D1Q9NWS0 290 aaKnown RBP22.65■■□□□ 1.22
CCDC9-201ENST00000221922 SLC17A6Q9P2U8 582 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 DNAJC16Q9Y2G8 782 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 INPP5FQ9Y2H2 1132 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 RPS6KL1Q9Y6S9 549 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 SHROOM3Q8TF72 1996 aa22.65■■□□□ 1.22
CCDC9-201ENST00000221922 CCDC189A1A4V9 331 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 LYPLA1O75608 230 aaPredicted RBP22.64■■□□□ 1.22
CCDC9-201ENST00000221922 PRKCGP05129 697 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 ANPEPP15144 967 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 RPL10AP62906 217 aaKnown RBP22.64■■□□□ 1.22
CCDC9-201ENST00000221922 PCLAFQ15004 111 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 UCMAQ8WVF2 138 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 EDEM1Q92611 657 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 CLPTM1LQ96KA5 538 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 CPNE1Q99829 537 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 TKTL2Q9H0I9 626 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 OR12D3Q9UGF7 316 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 SOX13Q9UN79 622 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 NLRC5Q86WI3 1866 aa22.64■■□□□ 1.22
CCDC9-201ENST00000221922 DNAH12Q6ZR08 3092 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 SERPINE1P05121 402 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 ITGA2BP08514 1039 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 TYMPP19971 482 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 GRK2P25098 689 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 CYP2C18P33260 490 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 GP5P40197 560 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 OVOS1Q6IE37 1185 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 BEND5Q7L4P6 421 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 KBTBD2Q8IY47 623 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 NPWQ8N729 165 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 OR52K1Q8NGK4 314 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 VCXQ9H320 206 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 VANGL2Q9ULK5 521 aa22.64■■□□□ 1.21
CCDC9-201ENST00000221922 NUP205Q92621 2012 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 KLHL2O95198 593 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 PROCP04070 461 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 SP100P23497 879 aaPredicted RBP22.63■■□□□ 1.21
CCDC9-201ENST00000221922 BDNFP23560 247 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 PSEN1P49768 467 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 GRTP1Q5TC63 336 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 THEM5Q8N1Q8 247 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 OR10T2Q8NGX3 314 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 FAM96AQ9H5X1 160 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 CASS4Q9NQ75 786 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 TMLHEQ9NVH6 421 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 PSAT1Q9Y617 370 aa22.63■■□□□ 1.21
CCDC9-201ENST00000221922 A0A088AWK7 358 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 ALOX15P16050 662 aaPredicted RBP22.62■■□□□ 1.21
CCDC9-201ENST00000221922 KCNA4P22459 653 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 COG7P83436 770 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 PDE1BQ01064 536 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 ZNF33AQ06730 810 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 TMCO4Q5TGY1 634 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 TAC4Q86UU9 113 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 HASPINQ8TF76 798 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 SORT1Q99523 831 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 RGS18Q9NS28 235 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 DNAJC28Q9NX36 388 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 SRRDQ9UH36 339 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 ADAM28Q9UKQ2 775 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 APOBEC2Q9Y235 224 aaKnown RBP22.62■■□□□ 1.21
CCDC9-201ENST00000221922 AP3B1O00203 1094 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 LRIG2O94898 1065 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 AMHP03971 560 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 AP2B1P63010 937 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 KCTD11Q693B1 232 aa22.62■■□□□ 1.21
CCDC9-201ENST00000221922 CTU1Q7Z7A3 348 aaKnown RBP22.62■■□□□ 1.21
CCDC9-201ENST00000221922 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.62■■□□□ 1.21
CCDC9-201ENST00000221922 RNF34Q969K3 372 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms