RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ACKR2O00590 384 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 ADCY6O43306 1168 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 ALDH1A2O94788 518 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 THP07101 528 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 ZCCHC18P0CG32 403 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 RARAP10276 462 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 ANPEPP15144 967 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 TCN1P20061 433 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 CXCR2P25025 360 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 AUHQ13825 339 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 PDK3Q15120 406 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 PTGES3Q15185 160 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 EZH2Q15910 746 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 C2CD6Q53TS8 623 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 DRICH1Q6PGQ1 229 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 TMC5Q6UXY8 1006 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 SLC44A2Q8IWA5 706 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 ATG16L2Q8NAA4 619 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 TOP1MTQ969P6 601 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 NMD3Q96D46 503 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 QKIQ96PU8 341 aaKnown RBP eCLIP4.48□□□□□ -1.692e-9■■■■■ 36.4
CHD9-201ENST00000219084 CBWD1Q9BRT8 395 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 PORCNQ9H237 461 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 RIBC2Q9H4K1 309 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 REEP1Q9H902 201 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 C2CD2Q9Y426 696 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 FAM170AA1A519 330 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 C21orf2O43822 256 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 LYPLA2O95372 231 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 LTA4HP09960 611 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 CCDC166P0CW27 439 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 S100A1P23297 94 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 ATP5F1P24539 256 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 RGS7P49802 495 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 CDC42P60953 191 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 YWHAZP63104 245 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 OOSP2Q86WS3 158 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 CBWD2Q8IUF1 395 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 YAF2Q8IY57 180 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 SLCO2A1Q92959 643 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 HSFY1Q96LI6 401 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 IDI2Q9BXS1 227 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 MIEF1Q9NQG6 463 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 DDX43Q9NXZ2 648 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 ARHGAP28Q9P2N2 729 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 RAPGEFL1Q9UHV5 662 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 INPP5FQ9Y2H2 1132 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 ARAP2Q8WZ64 1704 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 A0A096LPK6 155 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 PSMD12O00232 456 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 DDX3XO00571 662 aaKnown RBP eCLIP4.48□□□□□ -1.69
CHD9-201ENST00000219084 ATG7O95352 703 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 MOCS2O96007 188 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 DGKAP23743 735 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 RPA3P35244 121 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 SOAT1P35610 550 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 VAC14Q08AM6 782 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 TMEM132BQ14DG7 1078 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 TSC22D1Q15714 1073 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 PCSK7Q16549 785 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 MARC1Q5VT66 337 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 BBS12Q6ZW61 710 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 FGD2Q7Z6J4 655 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 CNTD1Q8N815 330 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 MOSPD2Q8NHP6 518 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 EPS8L1Q8TE68 723 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 RASSF5Q8WWW0 418 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 RXFP2Q8WXD0 754 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 GPR101Q96P66 508 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 C1QTNF7Q9BXJ2 289 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 KLHL31Q9H511 634 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 ETNK2Q9NVF9 386 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 CLN6Q9NWW5 311 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 GGA3Q9NZ52 723 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 AFF4Q9UHB7 1163 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 LZTS1Q9Y250 596 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 MIA3Q5JRA6 1907 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 MICAL2O94851 1124 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 COX4I1P13073 169 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 LBPP18428 481 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 BLVRAP53004 296 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 ACLYP53396 1101 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 CCDC81Q6ZN84 652 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 C1orf186Q6ZWK4 172 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 BHLHE22Q8NFJ8 381 aaPredicted RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 ATG4AQ8WYN0 398 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 BAP1Q92560 729 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 PROX1Q92786 737 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 DPY30Q9C005 99 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 EXOSC4Q9NPD3 245 aaKnown RBP4.48□□□□□ -1.69
CHD9-201ENST00000219084 CD320Q9NPF0 282 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 FAM49BQ9NUQ9 324 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 SPASTQ9UBP0 616 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 CDH9Q9ULB4 789 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 BTBD3Q9Y2F9 522 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 GRIN2DO15399 1336 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 USP54Q70EL1 1684 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 SLC28A1O00337 649 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 MRASO14807 208 aa4.48□□□□□ -1.69
CHD9-201ENST00000219084 RNASEH1O60930 286 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms