RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.58■□□□□ 0.4
RABGGTA-201ENST00000216840 SPATA22Q8NHS9 363 aa17.58■□□□□ 0.4
RABGGTA-201ENST00000216840 RBM22Q9NW64 420 aaKnown RBP eCLIP17.58■□□□□ 0.44e-8■■■■□ 23.7
RABGGTA-201ENST00000216840 SLC17A6Q9P2U8 582 aa17.58■□□□□ 0.4
RABGGTA-201ENST00000216840 HLA-DQB2P05538 268 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 KPNA1P52294 538 aaPredicted RBP17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 NAB1Q13506 487 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 ITIH4Q14624 930 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 SEPT7Q16181 437 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 NADSYN1Q6IA69 706 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 TMEM135Q86UB9 458 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 ZNF461Q8TAF7 563 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 CDKL2Q92772 493 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 HMCESQ96FZ2 354 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 ZNF212Q9UDV6 495 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 AAR2Q9Y312 384 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 HBS1LQ9Y450 684 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 GOLGA6L7A0A1B0GV03 622 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 KIAA0754O94854 1291 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 PEX11BO96011 259 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 CCNFP41002 786 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 KCNQ1P51787 676 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 CORO7P57737 925 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 MGAT5Q09328 741 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 CDH17Q12864 832 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 ACBD5Q5T8D3 534 aaPredicted RBP17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 SNX30Q5VWJ9 437 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 CGB2Q6NT52 195 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 ZNF449Q6P9G9 518 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 LINC00523Q86TU6 105 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 OVCA2Q8WZ82 227 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 SPOCK2Q92563 424 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 ZNF669Q96BR6 464 aaPredicted RBP17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 CERS2Q96G23 380 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 TMEM169Q96HH4 297 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 PAWRQ96IZ0 340 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 CDK5RAP1Q96SZ6 601 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 HERC2P3Q9BVR0 1158 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 DONSONQ9NYP3 566 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 HSFX1Q9UBD0 423 aa17.57■□□□□ 0.4
RABGGTA-201ENST00000216840 ANXA9O76027 345 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 USP1O94782 785 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 MT-CYBP00156 380 aaPredicted RBP17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ERVK-10P10266 1014 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ALADP13716 330 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 CSF2RAP15509 400 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 HMGA1P17096 107 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 TPH1P17752 444 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 CNTFP26441 200 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ATP5C1P36542 298 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ETV4P43268 484 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 GJA8P48165 433 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 FRG1Q14331 258 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ANO4Q32M45 955 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 MROH9Q5TGP6 573 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 PACS1Q6VY07 963 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ANKS4BQ8N8V4 417 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 PDZD8Q8NEN9 1154 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 FATE1Q969F0 183 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 MYEOVQ96EZ4 313 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 IL22Q9GZX6 179 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 C11orf49Q9H6J7 331 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 IL1RAPL1Q9NZN1 696 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 DNMT3LQ9UJW3 386 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ZCWPW2A0A1B0GU75 182 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 FAM237BA0A1B0GVD1 139 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 MAGEB16A2A368 324 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 TRIM43BA6NCK2 446 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ZNF840PA6NDX5 716 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 AP3B1O00203 1094 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 COPEO14579 308 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ATP9BO43861 1147 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 TIMP1P01033 207 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 DHRS4L1P0CG22 281 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 DNAJC3Q13217 504 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ANKRD20A4Q4UJ75 823 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 TPGS2Q68CL5 300 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 TIFABQ6ZNK6 161 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 FAM47EQ6ZV65 393 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 RASSF3Q86WH2 238 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 CHSY1Q86X52 802 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ANKLE1Q8NAG6 615 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 LRRC8CQ8TDW0 803 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 TRIM43Q96BQ3 446 aaPredicted RBP17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 ZNF512Q96ME7 567 aaPredicted RBP17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 RPRD1AQ96P16 312 aaPredicted RBP17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 TBL1YQ9BQ87 522 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 USP15Q9Y4E8 981 aaPredicted RBP17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 PSAT1Q9Y617 370 aa17.56■□□□□ 0.4
RABGGTA-201ENST00000216840 KIAA1671Q9BY89 1806 aa17.55■□□□□ 0.4
RABGGTA-201ENST00000216840 GJB5O95377 273 aa17.55■□□□□ 0.4
RABGGTA-201ENST00000216840 TACR2P21452 398 aa17.55■□□□□ 0.4
RABGGTA-201ENST00000216840 GEMP55040 296 aa17.55■□□□□ 0.4
RABGGTA-201ENST00000216840 WDR5P61964 334 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-201ENST00000216840 MTA1Q13330 715 aa17.55■□□□□ 0.4
RABGGTA-201ENST00000216840 BTG3Q14201 252 aaPredicted RBP17.55■□□□□ 0.4
RABGGTA-201ENST00000216840 MYLKQ15746 1914 aa17.55■□□□□ 0.4
RABGGTA-201ENST00000216840 CDHR3Q6ZTQ4 885 aa17.55■□□□□ 0.4
RABGGTA-201ENST00000216840 SPATA21Q7Z572 469 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms