RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ATN1P54259 1190 aaPredicted RBP30.29■■■□□ 2.44
PABPN1-201ENST00000216727 ANKRD20A4Q4UJ75 823 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 OTOAQ7RTW8 1153 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 FATE1Q969F0 183 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 ZNF419Q96HQ0 510 aaPredicted RBP30.29■■■□□ 2.44
PABPN1-201ENST00000216727 TOX2Q96NM4 488 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 TMEM248Q9NWD8 314 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 SLC12A4Q9UP95 1085 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 CAPN7Q9Y6W3 813 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 HTRA3P83110 453 aa30.28■■■□□ 2.44
PABPN1-201ENST00000216727 RING1Q06587 406 aa30.28■■■□□ 2.44
PABPN1-201ENST00000216727 C10orf120Q5SQS8 335 aa30.28■■■□□ 2.44
PABPN1-201ENST00000216727 CERCAMQ5T4B2 595 aa30.28■■■□□ 2.44
PABPN1-201ENST00000216727 SLC8B1Q6J4K2 584 aa30.28■■■□□ 2.44
PABPN1-201ENST00000216727 CES3Q6UWW8 571 aa30.28■■■□□ 2.44
PABPN1-201ENST00000216727 RASSF3Q86WH2 238 aa30.28■■■□□ 2.44
PABPN1-201ENST00000216727 ZNF669Q96BR6 464 aaPredicted RBP30.28■■■□□ 2.44
PABPN1-201ENST00000216727 NOL6Q9H6R4 1146 aaKnown RBP30.28■■■□□ 2.44
PABPN1-201ENST00000216727 CDY1Q9Y6F8 540 aa30.28■■■□□ 2.44
PABPN1-201ENST00000216727 ALDH7A1P49419 539 aaKnown RBP30.27■■■□□ 2.44
PABPN1-201ENST00000216727 PSMD5Q16401 504 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 ANO4Q32M45 955 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 PRSS55Q6UWB4 352 aaPredicted RBP30.27■■■□□ 2.44
PABPN1-201ENST00000216727 NDUFAF2Q8N183 169 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 FBXO22Q8NEZ5 403 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 CPNE1Q99829 537 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 TTLL2Q9BWV7 592 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 RXFP1Q9HBX9 757 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 UBP1Q9NZI7 540 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 SLC17A6Q9P2U8 582 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 MTRRQ9UBK8 725 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 SOX13Q9UN79 622 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 KLF11O14901 512 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 ERVK-10P10266 1014 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 GP5P40197 560 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 MTA1Q13330 715 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 PTPRN2Q92932 1015 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 PPP1R12CQ9BZL4 782 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 SLC13A1Q9BZW2 595 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 PCMTD2Q9NV79 361 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 IPO11Q9UI26 975 aaKnown RBP30.27■■■□□ 2.44
PABPN1-201ENST00000216727 PSAT1Q9Y617 370 aa30.27■■■□□ 2.44
PABPN1-201ENST00000216727 NYNRINQ9P2P1 1898 aaKnown RBP30.27■■■□□ 2.44
PABPN1-201ENST00000216727 DOCK4Q8N1I0 1966 aa30.26■■■□□ 2.43
PABPN1-201ENST00000216727 USP41Q3LFD5 358 aa30.26■■■□□ 2.43
PABPN1-201ENST00000216727 GALNTL6Q49A17 601 aa30.26■■■□□ 2.43
PABPN1-201ENST00000216727 MIB1Q86YT6 1006 aa30.26■■■□□ 2.43
PABPN1-201ENST00000216727 RMDN2Q96LZ7 410 aa30.26■■■□□ 2.43
PABPN1-201ENST00000216727 APOL2Q9BQE5 337 aa30.26■■■□□ 2.43
PABPN1-201ENST00000216727 UBE2OQ9C0C9 1292 aaKnown RBP30.26■■■□□ 2.43
PABPN1-201ENST00000216727 TXNDC16Q9P2K2 825 aa30.26■■■□□ 2.43
PABPN1-201ENST00000216727 BACE2Q9Y5Z0 518 aa30.26■■■□□ 2.43
PABPN1-201ENST00000216727 MICAL3Q7RTP6 2002 aa30.26■■■□□ 2.43
PABPN1-201ENST00000216727 IL1BP01584 269 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 ITGA2BP08514 1039 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 KPNA1P52294 538 aaPredicted RBP30.25■■■□□ 2.43
PABPN1-201ENST00000216727 CCDC15Q0P6D6 951 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 STXBP5Q5T5C0 1151 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 GRTP1Q5TC63 336 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 DEFB128Q7Z7B8 93 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 SPATA22Q8NHS9 363 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 RBM22Q9NW64 420 aaKnown RBP eCLIP30.25■■■□□ 2.431e-14■■□□□ 11.9
PABPN1-201ENST00000216727 USH1CQ9Y6N9 552 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 SLC38A8A6NNN8 435 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 ATP9BO43861 1147 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 ALDOAP04075 364 aaKnown RBP30.25■■■□□ 2.43
PABPN1-201ENST00000216727 GEMP55040 296 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 FYB2Q5VWT5 728 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 RNF168Q8IYW5 571 aaPredicted RBP30.25■■■□□ 2.43
PABPN1-201ENST00000216727 TBL1YQ9BQ87 522 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 KIFC1Q9BW19 673 aa30.25■■■□□ 2.43
PABPN1-201ENST00000216727 SLC12A8A0AV02 714 aa30.24■■■□□ 2.43
PABPN1-201ENST00000216727 HLA-DQB2P05538 268 aa30.24■■■□□ 2.43
PABPN1-201ENST00000216727 ATF6P18850 670 aa30.24■■■□□ 2.43
PABPN1-201ENST00000216727 TLE2Q04725 743 aa30.24■■■□□ 2.43
PABPN1-201ENST00000216727 CCDC117Q8IWD4 279 aaPredicted RBP30.24■■■□□ 2.43
PABPN1-201ENST00000216727 TRIM42Q8IWZ5 723 aa30.24■■■□□ 2.43
PABPN1-201ENST00000216727 ZNF398Q8TD17 642 aa30.24■■■□□ 2.43
PABPN1-201ENST00000216727 ALG13Q9NP73 1137 aaKnown RBP30.24■■■□□ 2.43
PABPN1-201ENST00000216727 DRGXA6NNA5 263 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 HNRNPDQ14103 355 aaKnown RBP30.23■■■□□ 2.43
PABPN1-201ENST00000216727 FBXL22Q6P050 247 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 LIN28BQ6ZN17 250 aaKnown RBP eCLIP30.23■■■□□ 2.431e-8■■■■□ 26.3
PABPN1-201ENST00000216727 FITM2Q8N6M3 262 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 MFSD3Q96ES6 412 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 CDK5RAP1Q96SZ6 601 aaKnown RBP30.23■■■□□ 2.43
PABPN1-201ENST00000216727 CWH43Q9H720 699 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 CHRAC1Q9NRG0 131 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 TLR5O60602 858 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 DNAJC8O75937 253 aaPredicted RBP30.23■■■□□ 2.43
PABPN1-201ENST00000216727 UBOX5O94941 541 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 PEX11BO96011 259 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 MT-CYBP00156 380 aaPredicted RBP30.23■■■□□ 2.43
PABPN1-201ENST00000216727 MNX1P50219 401 aaPredicted RBP30.23■■■□□ 2.43
PABPN1-201ENST00000216727 ALFQ53S48 1182 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 GIPC2Q8TF65 315 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 C10orf82Q8WW14 230 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 TSSK1BQ9BXA7 367 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 IL1RAPL1Q9NZN1 696 aa30.23■■■□□ 2.43
PABPN1-201ENST00000216727 ADAM12O43184 909 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms