RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SERPINF2P08697 491 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 F7P08709 466 aaPredicted RBP13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 MAPK1P28482 360 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 GRK4P32298 578 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 TAS2R40P59535 323 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 PFKPQ01813 784 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 GCNT7Q6ZNI0 430 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 GPSM1Q86YR5 675 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 TRAPPC5Q8IUR0 188 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 SYT12Q8IV01 421 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 SLC22A9Q8IVM8 553 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 ZNF518BQ9C0D4 1074 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 WDR41Q9HAD4 459 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 VPS9D1Q9Y2B5 631 aa13.82□□□□□ -0.2
TGFBR3-201ENST00000212355 ENO2P09104 434 aaPredicted RBP13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 COX7A2P14406 83 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 IDH2P48735 452 aaKnown RBP13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 PPIDQ08752 370 aaKnown RBP13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 HSPA14Q0VDF9 509 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 USP4Q13107 963 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 ITGB3BPQ13352 177 aaPredicted RBP13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 FIGNQ5HY92 759 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 ZNF276Q8N554 614 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 OMA1Q96E52 524 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 SMARCD1Q96GM5 515 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 DEPDC5O75140 1603 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 WNT10BO00744 389 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 TMEM132BQ14DG7 1078 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 CYP20A1Q6UW02 462 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 BCL2L14Q9BZR8 327 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 CATSPERZQ9NTU4 200 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 ARL15Q9NXU5 204 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 BTBD7Q9P203 1132 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.81□□□□□ -0.23e-6■■□□□ 14.3
TGFBR3-201ENST00000212355 PCDHA11Q9Y5I1 949 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 KIF20BQ96Q89 1820 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 NT5C1B-RDH14C9J2C7 533 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 RAD51BO15315 384 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 HLA-DQA2P01906 255 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 EPHA3P29320 983 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 GRIA4P48058 902 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 PHKG1Q16816 387 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 TRIM71Q2Q1W2 868 aaKnown RBP13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 ZNF280DQ6N043 979 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 CASP12Q6UXS9 341 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 KRT77Q7Z794 578 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 C10orf107Q8IVU9 208 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 CLPTM1LQ96KA5 538 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 NPAS2Q99743 824 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 POLR1BQ9H9Y6 1135 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 F9P00740 461 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 RRP1BQ14684 758 aaKnown RBP13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 TRMT5Q32P41 509 aaKnown RBP13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 CFAP52Q8N1V2 620 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 IL31RAQ8NI17 732 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 BBS4Q96RK4 519 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 FRMD8P1Q9BZ68 369 aaPredicted RBP13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 SYBUQ9NX95 663 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 DLC1Q96QB1 1528 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 C9JVG2 144 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 IFRD1O00458 451 aaPredicted RBP13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 PIK3CGP48736 1102 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 NAGLUP54802 743 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 NUP107P57740 925 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 PRKAA1Q13131 559 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 TRIQKQ629K1 86 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 ZCCHC9Q8N567 271 aaKnown RBP13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 CLHC1Q8NHS4 586 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 PCDHB5Q9Y5E4 795 aa13.81□□□□□ -0.2
TGFBR3-201ENST00000212355 RNF225M0QZC1 329 aaPredicted RBP13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 SCAMP1O15126 338 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 LDLRP01130 860 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 CNTFP26441 200 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 MMP13P45452 471 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 RAD23AP54725 363 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 DSG4Q86SJ6 1040 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 STK32AQ8WU08 396 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 TBCBQ99426 244 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 GBA2Q9HCG7 927 aaPredicted RBP13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 PNPOQ9NVS9 261 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 TMEM51Q9NW97 253 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 MAP3K13O43283 966 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 CXCR3P49682 368 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 TP53INP1Q96A56 240 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 TMEM159Q96B96 161 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 CAMKK2Q96RR4 588 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 ERVK-5Q9HDB9 667 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 CLIC5Q9NZA1 410 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 SLC17A7Q9P2U7 560 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 CLEC4AQ9UMR7 237 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 FAM220BPB1ANY3 271 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 FKBP6O75344 327 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 MCL1Q07820 350 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 ELMO1Q92556 727 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 VPS33AQ96AX1 596 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 NMRK1Q9NWW6 199 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 U3KQV3 271 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 CHURC1-FNTBB4DL54 471 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 CYP2A7P20853 494 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 PTDSS1P48651 473 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms