RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PTPN7P35236 360 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 SERPINB8P50452 374 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 TTC30AQ86WT1 665 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 TMCO1Q9UM00 188 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 ITGA7Q13683 1181 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 ADGRE1Q14246 886 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 SOWAHAQ2M3V2 549 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 LDLRAP1Q5SW96 308 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 KLHL35Q6PF15 583 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 RDM1Q8NG50 284 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 MCRS1Q96EZ8 462 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 TBCBQ99426 244 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 FAM49AQ9H0Q0 323 aaPredicted RBP17.07■□□□□ 0.32
CTDP1-201ENST00000075430 PTTG2Q9NZH5 202 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 CILPO75339 1184 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 VAPBO95292 243 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 ACAT1P24752 427 aaKnown RBP17.06■□□□□ 0.32
CTDP1-201ENST00000075430 GP5P40197 560 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 POU6F1Q14863 301 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 NEDD8Q15843 81 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 KLC3Q6P597 504 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 SLC41A1Q8IVJ1 513 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 RIN3Q8TB24 985 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 URGCPQ8TCY9 931 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 ACE2Q9BYF1 805 aaPredicted RBP17.06■□□□□ 0.32
CTDP1-201ENST00000075430 RRN3Q9NYV6 651 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 GIMAP2Q9UG22 337 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 KCTD2Q14681 263 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 ZBTB49Q6ZSB9 765 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 FASTKD5Q7L8L6 764 aaKnown RBP17.06■□□□□ 0.32
CTDP1-201ENST00000075430 STK39Q9UEW8 545 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 STYXL1Q9Y6J8 313 aa17.06■□□□□ 0.32
CTDP1-201ENST00000075430 C7orf72A4D263 438 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 RGSL1A5PLK6 1076 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 FBXO21O94952 628 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 TXNP10599 105 aaKnown RBP17.05■□□□□ 0.32
CTDP1-201ENST00000075430 SULT1E1P49888 294 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 HNRNPDQ14103 355 aaKnown RBP17.05■□□□□ 0.32
CTDP1-201ENST00000075430 NUP93Q8N1F7 819 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 PARP8Q8N3A8 854 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 THAP11Q96EK4 314 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 BFARQ9NZS9 450 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 CACNG4Q9UBN1 327 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 DDNO94850 711 aaPredicted RBP17.05■□□□□ 0.32
CTDP1-201ENST00000075430 VDRP11473 427 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 SPRP35270 261 aaPredicted RBP17.05■□□□□ 0.32
CTDP1-201ENST00000075430 MPP3Q13368 585 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 VGLL4Q14135 290 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 TMEM132DQ14C87 1099 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 C16orf89Q6UX73 402 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 EBF1Q9UH73 591 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 CDYLQ9Y232 598 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 J3QRK9 145 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 ARL1P40616 181 aaPredicted RBP17.05■□□□□ 0.32
CTDP1-201ENST00000075430 SLC5A3P53794 718 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 GRM3Q14832 879 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 PPP1R3AQ16821 1122 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 FBXL8Q96CD0 374 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 SIK2Q9H0K1 926 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 PDGFCQ9NRA1 345 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 CDC14AQ9UNH5 594 aa17.05■□□□□ 0.32
CTDP1-201ENST00000075430 KPNA7A9QM74 516 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 C19orf81C9J6K1 198 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 GNAO1P09471 354 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 GRIA3P42263 894 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 LPIN1Q14693 890 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 DENND6AQ8IWF6 608 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 FNIP1Q8TF40 1166 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 GIPC3Q8TF64 312 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 EFCAB1Q9HAE3 211 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 MAP3K20Q9NYL2 800 aaKnown RBP17.04■□□□□ 0.32
CTDP1-201ENST00000075430 COL11A2P13942 1736 aaPredicted RBP17.04■□□□□ 0.32
CTDP1-201ENST00000075430 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 E7ENX8 843 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 CLDN5O00501 218 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 CES1P23141 567 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 L1CAMP32004 1257 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 NDST2P52849 883 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 PLCL1Q15111 1095 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 PDK2Q15119 407 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 OGFRL1Q5TC84 451 aaPredicted RBP17.04■□□□□ 0.32
CTDP1-201ENST00000075430 GPR107Q5VW38 600 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 NT5DC4Q86YG4 428 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 LPGAT1Q92604 370 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 SENP6Q9GZR1 1112 aaPredicted RBP17.04■□□□□ 0.32
CTDP1-201ENST00000075430 LHX5Q9H2C1 402 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 DPP3Q9NY33 737 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 MOCS1Q9NZB8 636 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 AP4S1Q9Y587 144 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 SIPA1L1O43166 1804 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 CCL22O00626 93 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 STRNO43815 780 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 EFNA5P52803 228 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 SLC6A3Q01959 620 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 XRRA1Q6P2D8 792 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 DEFB106AQ8N104 65 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 ZNF567Q8N184 647 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 MTMR14Q8NCE2 650 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 KLRG1Q96E93 195 aa17.04■□□□□ 0.32
CTDP1-201ENST00000075430 RTKNQ9BST9 563 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms