RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 CBWD3Q5JTY5 395 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 PCID2Q5JVF3 399 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 CBWD5Q5RIA9 395 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 DENND1BQ6P3S1 775 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 AFTPHQ6ULP2 937 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 FAM180AQ6UWF9 173 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 KCNK18Q7Z418 384 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 MON1AQ86VX9 555 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 LRRC6Q86X45 466 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 AGGF1Q8N302 714 aaeCLIP4.32□□□□□ -1.72
CFTR-201ENST00000003084 IRF7Q92985 503 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 UBE2E3Q969T4 207 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 PLD4Q96BZ4 506 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 DTNBP1Q96EV8 351 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 SNX27Q96L92 541 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 MAGEB18Q96M61 343 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 KCNJ15Q99712 375 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 ZNF670Q9BS34 389 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 PDZD7Q9H5P4 517 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 GOLGA8RI6L899 631 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 ZBTB39O15060 712 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 GUCY1B2O75343 617 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 PGRP06401 933 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 ITGB6P18564 788 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 GRK2P25098 689 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 MIPP30301 263 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 PTPN7P35236 360 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 CHI3L1P36222 383 aaPredicted RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 CCR3P51677 355 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 CCNG1P51959 295 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 SKOR1P84550 965 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 EVX2Q03828 476 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 STX5Q13190 355 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 MAMLD1Q13495 774 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 MEA1Q16626 185 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 KYNUQ16719 465 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 GRAMD1BQ3KR37 738 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 MROH9Q5TGP6 573 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 PLPP4Q5VZY2 271 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 TRMT11Q7Z4G4 463 aaKnown RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 LEMD2Q8NC56 503 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 TNFRSF25Q93038 417 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 TP53INP1Q96A56 240 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 QRFPRQ96P65 431 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 C11orf84Q9BUA3 381 aaPredicted RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 ING2Q9H160 280 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 PABPC3Q9H361 631 aaKnown RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 KCTD10Q9H3F6 313 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 RNPEPQ9H4A4 650 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 RAD21L1Q9H4I0 556 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 RGS18Q9NS28 235 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 ARHGAP20Q9P2F6 1191 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 SRRDQ9UH36 339 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 TBC1D30Q9Y2I9 924 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 ACOT9Q9Y305 439 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 hCG_2014768A0A024R1R8 64 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 SNUPNO95149 360 aaKnown RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 FAM107AO95990 144 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 PCNAP12004 261 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 CXCR2P25025 360 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 MPSTP25325 297 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 WEE1P30291 646 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 CDH8P55286 799 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 IL2P60568 153 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 CDK16Q00536 496 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 TBX2Q13207 712 aaPredicted RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 GRB14Q14449 540 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 CYP2A13Q16696 494 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 PAGE2BQ5JRK9 111 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 INTS6LQ5JSJ4 861 aaKnown RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 ATAT1Q5SQI0 421 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 LAYNQ6UX15 382 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 KCNMB4Q86W47 210 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 PSTKQ8IV42 348 aaKnown RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 PIP4K2CQ8TBX8 421 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 SAMD11Q96NU1 681 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 SH3GL1Q99961 368 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 SPASTQ9UBP0 616 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 RPS6KB2Q9UBS0 482 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 MORF4L1Q9UBU8 362 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 ADAM28Q9UKQ2 775 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 MRPS17Q9Y2R5 130 aaKnown RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 CRYL1Q9Y2S2 319 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 USP15Q9Y4E8 981 aaPredicted RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 PCDHA11Q9Y5I1 949 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 C10orf71Q711Q0 1435 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 KLRC4O43908 158 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 KRT6AP02538 564 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 KRT6BP04259 564 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 PTPN2P17706 415 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 KRT20P35900 424 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 TNFSF9P41273 254 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 KRT6CP48668 564 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 SMAD1Q15797 465 aaKnown RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 IL17AQ16552 155 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 MFSD4BQ5TF39 518 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 POLNQ7Z5Q5 900 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 TFAP2DQ7Z6R9 452 aa4.32□□□□□ -1.72
CFTR-201ENST00000003084 CTU1Q7Z7A3 348 aaKnown RBP4.32□□□□□ -1.72
CFTR-201ENST00000003084 CYP4Z1Q86W10 505 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms