RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Slc25a19Q9DAM5 318 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Myh6Q02566 1938 aaKnown RBP12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Cntnap4Q99P47 1310 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 C87414E9PWI7 475 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Hsd17b14E9Q3D4 273 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Mmp15O54732 657 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Krt1P04104 637 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Serpina6Q06770 397 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Patl1Q3TC46 770 aaKnown RBP12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Pdlim7Q3TJD7 457 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Znf354cQ571J5 560 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 G2e3Q5RJY2 716 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 1700001K19RikQ80ZT1 219 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Aoc2Q812C9 757 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 HadhaQ8BMS1 763 aaKnown RBP12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nde1Q9CZA6 344 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Syf2Q9D198 242 aaKnown RBP12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Poc5Q9DBS8 558 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Tmem115Q9WUH1 350 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Scgb2b12S4R2L0 112 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Adgra2Q91ZV8 1336 aa12.08□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gm2832F7AEC7 200 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Anxa4P97429 319 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 RalgdsQ03385 852 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gdpd4Q3TT99 632 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Wee2Q66JT0 555 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Magee1Q6PCZ4 918 aaKnown RBP12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gpc2Q8BKV1 579 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Slc43a1Q8BSM7 564 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Dact1Q8R4A3 778 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Pcdhb17Q91VD8 799 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Cpt1bQ924X2 772 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gid8Q9D7M1 228 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ddi1Q9DAF3 408 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nup50Q9JIH2 466 aaKnown RBP12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Padi3Q9Z184 664 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Rpl9-ps6A0A140T8T4 192 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Erich2E9Q1A6 463 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Tap1P21958 724 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Rpl9P51410 192 aaKnown RBP12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 EsrrgP62509 458 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Usp7Q6A4J8 1103 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Trim36Q80WG7 729 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Kcns3Q8BQZ8 491 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ston1Q8CDJ8 730 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Acsf2Q8VCW8 615 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Exoc2Q9D4H1 924 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Myh7Q91Z83 1935 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Rpl21O09167 160 aaKnown RBP12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Prkag1O54950 330 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 ThbdP15306 577 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Krt80Q0VBK2 452 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Arid5aQ3U108 590 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 TdrpQ8C5P7 182 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Tp53bp2Q8CG79 1128 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 CopaQ8CIE6 1224 aaKnown RBP12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Cyp3a44Q9EQW4 504 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Iqcj-Schip1A0A088MLT8 559 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Klhl41A2AUC9 606 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Schip1P0DPB4 484 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Pou2f2Q00196 463 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Hsdl2Q2TPA8 490 aaKnown RBP12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Rps6ka6Q7TPS0 764 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Stkld1Q80YS9 662 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ddx42Q810A7 929 aaKnown RBP12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Slc41a1Q8BJA2 512 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Trpa1Q8BLA8 1125 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Lrrc40Q9CRC8 602 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Mphosph6Q9D1Q1 161 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 HaghlQ9DB32 283 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Smg9Q9DB90 520 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Mpp6Q9JLB0 553 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Acox2Q9QXD1 681 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Map2k5Q9WVS7 448 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Dyrk1bQ9Z188 629 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Marf1Q8BJ34 1730 aaKnown RBP12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Zfp811A0A0J9YU71 552 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ctnnd2O35927 1247 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Snrpd1P62315 119 aaKnown RBP12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Cdk16Q04735 496 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Slfn4Q3UV66 602 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 OgdhQ60597 1023 aaKnown RBP12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Tmem164Q6PHN7 296 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 ZfatQ7TS63 1237 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Fnip2Q80TD3 1108 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Dupd1Q8BK84 215 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 AopepQ8BXQ6 817 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Adcy4Q91WF3 1077 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ecrg4Q99LS0 148 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 March2Q99M02 246 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Tpgs1Q99MS8 303 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 MycbpQ9EQS3 103 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Phf2Q9WTU0 1096 aa12.07□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Hk1P17710 974 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Sar1aP36536 198 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 ItgavP43406 1044 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 SqleP52019 572 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 DselQ0VBN2 1207 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Dmc1Q61880 340 aa12.06□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ttc23Q8CHY7 488 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms