RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 ShdO88834 343 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Acvr2bP27040 536 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Rpl10aP53026 217 aaKnown RBP11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 HpcaP84075 193 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gngt2Q61017 69 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Slc20a1Q61609 681 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cyp3a16Q64481 504 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Znf513Q6PD29 541 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tas2r115Q7M719 310 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 MtbpQ8BJS8 894 aaKnown RBP11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cops7bQ8BV13 264 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 TbcdQ8BYA0 1196 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tspan14Q8QZY6 270 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Agr3Q8R3W7 165 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Olfr784Q8VFZ9 319 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 HnmtQ91VF2 295 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 CmasQ99KK2 432 aaKnown RBP11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 TtpalQ9D3D0 343 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Dlgap1Q9D415 992 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cyp2c55Q9D816 490 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ifrd2Q9D8U0 441 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tnip3A0A1D5RMN0 279 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 NuggcD3YWJ0 796 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 FancfE9Q5Z5 343 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Zfp788E9Q980 884 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tnfrsf11bO08712 401 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Sult1e1P49891 295 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 TankP70347 448 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 2700097O09RikQ6PGK3 301 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Trnp1Q80ZI1 223 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Sept8Q8CHH9 429 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 CtbsQ8R242 366 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Vmn1r64Q8R2B8 320 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Npm3Q9CPP0 175 aaKnown RBP11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Katnbl1Q9CWJ3 299 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Olfr414E9Q5P8 317 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Psmc3O88685 442 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Hoxb8P09632 243 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Scg3P47867 471 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Dsc2P55292 902 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Krt80Q0VBK2 452 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Nt5dc3Q3UHB1 546 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Fam160a1Q505K2 1081 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 JrkQ60976 557 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Lcp1Q61233 627 aaKnown RBP11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Six1Q62231 284 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Rtl3Q6P1Y1 553 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Serpinb10Q8K1K6 397 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cyp2c70Q91W64 489 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Q922M7 232 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ptpn3A2ALK8 913 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Olfr1145A2AVC7 325 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 DcxO88809 366 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Nr3c1P06537 783 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Il1rl1P14719 567 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pdcd1Q02242 288 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pfdn6Q03958 127 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Fam91a1Q3UVG3 837 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Grm6Q5NCH9 871 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Znf821Q6PD05 413 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Atp6v1g3Q8BMC1 118 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Zfp985A2A7A5 519 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm4907B1AXB9 411 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ifit3bE9PV48 403 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ptar1E9QAB6 424 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm17535J3KMR8 224 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Olfr611K7N609 323 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Olfr612L7N462 323 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Sec22bO08547 215 aaKnown RBP11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cd19P25918 547 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ckmt1P30275 418 aaKnown RBP11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Emilin3P59900 758 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Naa20P61600 178 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 PrkacbP68181 351 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cdh9P70407 786 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Grid2ipQ0QWG9 1203 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Dennd1bQ3U1T9 766 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mxd4Q60948 209 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Hbs1lQ69ZS7 682 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Fam185aQ7TPD2 378 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tbx10Q810F8 385 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Zmym6Q8BS54 1249 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pcdhb7Q8CDY9 829 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Fcho1Q8K285 873 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tas1r3Q925D8 858 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Zmat2Q9CPW7 199 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Dnajc18Q9CZJ9 357 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Q9D937 123 aaKnown RBP11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 PollQ9QXE2 573 aaKnown RBP11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Nrf1Q9WU00 503 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Arap2Q8BZ05 1703 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mtcl1Q3UHU5 1945 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Smok3cA0A087WSF2 504 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 IqccA2ADZ8 418 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm12394A2AKP6 982 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pramef17A2ASJ1 475 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 ZxdbA2CE44 873 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Top6blJ3QMY9 579 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Olfr1022L7MTT3 315 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mup5P11591 180 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms