RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 PDIK1LQ8N165 341 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 LZTR1Q8N653 840 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 RTL3Q8N8U3 475 aaKnown RBP9.07□□□□□ -0.96
PHGDH-219ENST00000641513 GBP7Q8N8V2 638 aaPredicted RBP9.07□□□□□ -0.96
PHGDH-219ENST00000641513 NAT8LQ8N9F0 302 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 CCDC197Q8NCU1 140 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 SPPL3Q8TCT6 385 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 USP33Q8TEY7 942 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 MRPS31Q92665 395 aaKnown RBP9.07□□□□□ -0.96
PHGDH-219ENST00000641513 PLD4Q96BZ4 506 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 SEC16BQ96JE7 1060 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 CABS1Q96KC9 395 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 SPATA13Q96N96 652 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 SLC39A8Q9C0K1 460 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 BRD8Q9H0E9 1235 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 VPS37BQ9H9H4 285 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 SSU72Q9NP77 194 aaKnown RBP9.07□□□□□ -0.96
PHGDH-219ENST00000641513 PPANQ9NQ55 473 aaKnown RBP9.07□□□□□ -0.96
PHGDH-219ENST00000641513 GKN1Q9NS71 199 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 INTS9Q9NV88 658 aaKnown RBP9.07□□□□□ -0.96
PHGDH-219ENST00000641513 SMPD4Q9NXE4 827 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 DONSONQ9NYP3 566 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 NINJ2Q9NZG7 142 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 TTLL3Q9Y4R7 772 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 ASB3Q9Y575 518 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.07□□□□□ -0.96
PHGDH-219ENST00000641513 MYOFQ9NZM1 2061 aa9.07□□□□□ -0.96
PHGDH-219ENST00000641513 CLUHO75153 1309 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 C2orf16Q68DN1 1984 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 C2orf71A6NGG8 1288 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 GRM6O15303 877 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 MTSS1O43312 755 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 ACSL4O60488 711 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 OPHN1O60890 802 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 BANF1O75531 89 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 DNAJC8O75937 253 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 CNTN5O94779 1100 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 TMEM63AO94886 807 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 METTL18O95568 372 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 CA3P07451 260 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 RHOQP17081 205 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 DNAJB1P25685 340 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 PTPN3P26045 913 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 PSMB4P28070 264 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 HOXC13P31276 330 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 MAGEA10P43363 369 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 SARNPP82979 210 aaKnown RBP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 CYP4F8P98187 520 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 UBE3AQ05086 875 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 MTA1Q13330 715 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 KCNJ11Q14654 390 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 SHHQ15465 462 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 FNBP1LQ5T0N5 605 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 UBAP2Q5T6F2 1119 aaKnown RBP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 ACBD5Q5T8D3 534 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 TXNDC8Q6A555 127 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 TTC19Q6DKK2 380 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 ITPRIPL1Q6GPH6 555 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 FBXL22Q6P050 247 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 RFWD3Q6PCD5 774 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 KLHDC10Q6PID8 442 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 SPRED2Q7Z698 418 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 CPLX4Q7Z7G2 160 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 CIR1Q86X95 450 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 PALM2Q8IXS6 379 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 ZNF567Q8N184 647 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 CFAP52Q8N1V2 620 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 ZNF276Q8N554 614 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 ARL14EPQ8N8R7 260 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 MRPL43Q8N983 215 aaKnown RBP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 PYROXD1Q8WU10 500 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 SLC22A17Q8WUG5 538 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 IGSF8Q969P0 613 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 GRAMD1AQ96CP6 724 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 HDAC11Q96DB2 347 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 SGSM3Q96HU1 749 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 AGAP3Q96P47 875 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 CORO1BQ9BR76 489 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 RNF38Q9H0F5 515 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 ATXN3LQ9H3M9 355 aa9.06□□□□□ -0.96
PHGDH-219ENST00000641513 PPARGC1AQ9UBK2 798 aaKnown RBP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 MKI67P46013 3256 aaKnown RBP9.06□□□□□ -0.96
PHGDH-219ENST00000641513 NOTCH4Q99466 2003 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 NUP210Q8TEM1 1887 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 ARHGAP42A6NI28 874 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 WASH4PA8MWX3 477 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 TRDMT1O14717 391 aaKnown RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 TSPAN3O60637 253 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 STC2O76061 302 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 ARHGEF15O94989 841 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 OAS1P00973 400 aaKnown RBP9.05□□□□□ -0.96
PHGDH-219ENST00000641513 JCHAINP01591 159 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 F11P03951 625 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 RB1P06400 928 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 CKMP06732 381 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 GJA1P17302 382 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 HDCP19113 662 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 TPSB2P20231 275 aa9.05□□□□□ -0.96
PHGDH-219ENST00000641513 CCNCP24863 283 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms