RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 C3orf70A6NLC5 250 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-218ENST00000641491 HACD1B0YJ81 288 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 RASA4BC9J798 803 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 I6L893 689 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-218ENST00000641491 CBX4O00257 560 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 DCLK1O15075 740 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 RASA4O43374 803 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 MFSD11O43934 449 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 PABPC1P11940 636 aaKnown RBP13.27□□□□□ -0.29
PHGDH-218ENST00000641491 GLULP15104 373 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 GJA4P35212 333 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 CSKP41240 450 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 TNNT3P45378 269 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-218ENST00000641491 SGSHP51688 502 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 EIF3EP60228 445 aaKnown RBP13.27□□□□□ -0.29
PHGDH-218ENST00000641491 LMNB2Q03252 620 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 PAFAH1B3Q15102 231 aaKnown RBP13.27□□□□□ -0.29
PHGDH-218ENST00000641491 DCAF12L1Q5VU92 463 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 NCBP2-AS2Q69YL0 99 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 HEATR6Q6AI08 1181 aaKnown RBP13.27□□□□□ -0.29
PHGDH-218ENST00000641491 SLC9A4Q6AI14 798 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 AADACL2Q6P093 401 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 METTL3Q86U44 580 aaKnown RBP13.27□□□□□ -0.29
PHGDH-218ENST00000641491 NLRP14Q86W24 1093 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 RALGPS2Q86X27 583 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-218ENST00000641491 PAF1Q8N7H5 531 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 CEP112Q8N8E3 955 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 GRK7Q8WTQ7 553 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 LRRC45Q96CN5 670 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 P2RY13Q9BPV8 354 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 RPP25Q9BUL9 199 aaKnown RBP13.27□□□□□ -0.29
PHGDH-218ENST00000641491 MAGEB5Q9BZ81 275 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 TRPV5Q9NQA5 729 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 HPS4Q9NQG7 708 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 FEZ2Q9UHY8 353 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-218ENST00000641491 CDC23Q9UJX2 597 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 PLA2G4CQ9UP65 541 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 DENND4AQ7Z401 1863 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 ANAPC1Q9H1A4 1944 aa13.27□□□□□ -0.29
PHGDH-218ENST00000641491 WDFY4Q6ZS81 3184 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 CFAP69A5D8W1 941 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 SPECC1L-ADORA2AF8WAN1 911 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 MTSS1O43312 755 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 TULP3O75386 442 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 ASLP04424 464 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 GRIA2P42262 883 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 HELZP42694 1942 aaKnown RBP13.26□□□□□ -0.29
PHGDH-218ENST00000641491 OTUD4Q01804 1114 aaKnown RBP13.26□□□□□ -0.29
PHGDH-218ENST00000641491 LMAN2Q12907 356 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 ZNF235Q14590 738 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 EIF4HQ15056 248 aaKnown RBP13.26□□□□□ -0.29
PHGDH-218ENST00000641491 SDE2Q6IQ49 451 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 POTEHQ6S545 545 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 ZNF852Q6ZMS4 543 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 TPRG1Q6ZUI0 275 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 ZC3H18Q86VM9 953 aaKnown RBP13.26□□□□□ -0.29
PHGDH-218ENST00000641491 CCDC105Q8IYK2 499 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 ZNF683Q8IZ20 524 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 UMODL1-AS1Q8N2C9 162 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 PLD5Q8N7P1 536 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 CCDC89Q8N998 374 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 DCAF4L2Q8NA75 395 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 COG1Q8WTW3 980 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 MFSD1Q9H3U5 465 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 SLC2A4RGQ9NR83 387 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 HEBP1Q9NRV9 189 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 TTC7AQ9ULT0 858 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-218ENST00000641491 ZNF148Q9UQR1 794 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 TBC1D30Q9Y2I9 924 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 TTLL3Q9Y4R7 772 aa13.26□□□□□ -0.29
PHGDH-218ENST00000641491 CTAGE15A4D2H0 777 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 CCDC188H7C350 402 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 ZNF185O15231 689 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 ZBTB24O43167 697 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-218ENST00000641491 TIMM44O43615 452 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 GAS8O95995 478 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 CTAGE8P0CG41 777 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 IL4RP24394 825 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 RECQLP46063 649 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-218ENST00000641491 PAPOLAP51003 745 aaKnown RBP13.25□□□□□ -0.29
PHGDH-218ENST00000641491 GBE1Q04446 702 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 BYSLQ13895 437 aaKnown RBP13.25□□□□□ -0.29
PHGDH-218ENST00000641491 LRRC32Q14392 662 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 MLF2Q15773 248 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-218ENST00000641491 FNDC3BQ53EP0 1204 aaKnown RBP13.25□□□□□ -0.29
PHGDH-218ENST00000641491 PITRM1Q5JRX3 1037 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 TMCO4Q5TGY1 634 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 TRMT11Q7Z4G4 463 aaKnown RBP13.25□□□□□ -0.29
PHGDH-218ENST00000641491 CTAGE6Q86UF2 777 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 RNF135Q8IUD6 432 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 CTAGE4Q8IX94 777 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 CCDC13Q8IYE1 715 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 RASGEF1CQ8N431 466 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 PQLC3Q8N755 202 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 ACTL9Q8TC94 416 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 FAM3CQ92520 227 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 MAGOHBQ96A72 148 aaKnown RBP13.25□□□□□ -0.29
PHGDH-218ENST00000641491 ACDQ96AP0 544 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 HMCESQ96FZ2 354 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 MS4A14Q96JA4 679 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms