RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 NCF4Q15080 339 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 CDC42EP5Q6NZY7 148 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 DGLUCYQ7Z3D6 616 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 CCNYL1Q8N7R7 359 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 FAM45AQ8TCE6 357 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 PPP1R36Q96LQ0 422 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 TWNKQ96RR1 684 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 SENP7Q9BQF6 1050 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 QTRT2Q9H974 415 aaKnown RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 FEM1BQ9UK73 627 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 ARHGEF28Q8N1W1 1705 aaKnown RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 ZW10O43264 779 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 TRIM3O75382 744 aaPredicted RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 WDPCPO95876 746 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 SSTP61278 116 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 MRPS22P82650 360 aaKnown RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 OVGP1Q12889 678 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 CRTC3Q6UUV7 619 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 LRRC8DQ7L1W4 858 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 SAPCD2Q86UD0 394 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 MCEEQ96PE7 176 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 ERMAPQ96PL5 475 aaPredicted RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 PSKH2Q96QS6 385 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 HERC2P3Q9BVR0 1158 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 CADM1Q9BY67 442 aaKnown RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 PPA2Q9H2U2 334 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 AGPAT3Q9NRZ7 376 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 SPATA2Q9UM82 520 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 RCCD1A6NED2 376 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 TRIM49D1C9J1S8 452 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 UGT2B4P06133 528 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 APRTP07741 180 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 SDC4P31431 198 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 MMRN1Q13201 1228 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 ADGRE1Q14246 886 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 DMC1Q14565 340 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 MAPK11Q15759 364 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 SMTNL2Q2TAL5 461 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 SPDYE2Q495Y8 402 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 ZC3H12BQ5HYM0 836 aaKnown RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 LINC00116Q8NCU8 138 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 TEX47Q8TBZ9 253 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 TMEM143Q96AN5 459 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 ASB2Q96Q27 587 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 SNX18Q96RF0 628 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 HTATIP2Q9BUP3 242 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 N6AMT1Q9Y5N5 214 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 V9GYQ6 96 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 KIF20BQ96Q89 1820 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 WTIPA6NIX2 430 aaPredicted RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 ORC5O43913 435 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 IL6P05231 212 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 OR2B6P58173 313 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 HMBOX1Q6NT76 420 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 EID3Q8N140 333 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 UBASH3BQ8TF42 649 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 PYDC1Q8WXC3 89 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 ZNF486Q96H40 463 aaPredicted RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 DHX35Q9H5Z1 703 aaKnown RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 PTTG3PQ9NZH4 202 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 AKAP7Q9P0M2 348 aaPredicted RBP8.41□□□□□ -1.06
NECAP1-227ENST00000640648 PCDHA10Q9Y5I2 948 aa8.41□□□□□ -1.06
NECAP1-227ENST00000640648 ITSN1Q15811 1721 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 TK2O00142 265 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 TBX3O15119 743 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 FBXO21O94952 628 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 SESN2P58004 480 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 GRAMD2AQ8IUY3 354 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 SEPT12Q8IYM1 358 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 TBC1D21Q8IYX1 336 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 VANGL1Q8TAA9 524 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 PIWIL2Q8TC59 973 aaKnown RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 NSUN6Q8TEA1 469 aaKnown RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 MTG1Q9BT17 334 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 C2orf49Q9BVC5 232 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 CHMP1AQ9HD42 196 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 ANKMY1Q9P2S6 941 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 KIF13AQ9H1H9 1805 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 FAM92AA1XBS5 289 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 CCDC154A6NI56 674 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 HAT1O14929 419 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 KIAA0391O15091 583 aaKnown RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 MSH4O15457 936 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 NOL4O94818 638 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 IL18RAPO95256 599 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 SGPL1O95470 568 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 PEPDP12955 493 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 SFNP31947 248 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 MYBPC1Q00872 1141 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 DDR2Q16832 855 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 WDR72Q3MJ13 1102 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 PRR5LQ6MZQ0 368 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 FASTKD5Q7L8L6 764 aaKnown RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 TMC7Q7Z402 723 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 SYTL1Q8IYJ3 562 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 GLIS3Q8NEA6 775 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 OR8H1Q8NGG4 311 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms