RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 BLOC1S6Q9UL45 172 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 SF3B1O75533 1304 aaKnown RBP eCLIP17.88■□□□□ 0.454e-6■■■■■ 139.6
SCARB2-223ENST00000640640 LRP6O75581 1613 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 CNTNAP1P78357 1384 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 C16orf96A6NNT2 1141 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 LZTS3O60299 673 aaPredicted RBP17.88■□□□□ 0.45
SCARB2-223ENST00000640640 ILF2Q12905 390 aaKnown RBP17.88■□□□□ 0.45
SCARB2-223ENST00000640640 SLC10A6Q3KNW5 377 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 DCLRE1AQ6PJP8 1040 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 MAML3Q96JK9 1138 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 SYT17Q9BSW7 474 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 ACTR8Q9H981 624 aa17.88■□□□□ 0.45
SCARB2-223ENST00000640640 CHCHD3Q9NX63 227 aaKnown RBP17.88■□□□□ 0.45
SCARB2-223ENST00000640640 FAM237BA0A1B0GVD1 139 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 ZNF7P17097 686 aaPredicted RBP17.87■□□□□ 0.45
SCARB2-223ENST00000640640 KPNB1Q14974 876 aaKnown RBP17.87■□□□□ 0.45
SCARB2-223ENST00000640640 PLD5Q8N7P1 536 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 ACMSDQ8TDX5 336 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 CXorf56Q9H5V9 222 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 ZSCAN9O15535 394 aaPredicted RBP17.87■□□□□ 0.45
SCARB2-223ENST00000640640 BAIAP3O94812 1187 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 DYNC1I2Q13409 638 aaKnown RBP17.87■□□□□ 0.45
SCARB2-223ENST00000640640 EIF2AQ9BY44 585 aaKnown RBP17.87■□□□□ 0.45
SCARB2-223ENST00000640640 CD86P42081 329 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 HIST2H2ACQ16777 129 aaPredicted RBP17.87■□□□□ 0.45
SCARB2-223ENST00000640640 HIST2H2AA3Q6FI13 130 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 MFSD5Q6N075 450 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 RNF168Q8IYW5 571 aaPredicted RBP17.87■□□□□ 0.45
SCARB2-223ENST00000640640 ZYG11BQ9C0D3 744 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 RPTORQ8N122 1335 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 UNC5CO95185 931 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 ITGA2BP08514 1039 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 ATP6V1B1P15313 513 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 ITGB6P18564 788 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 ATP6AP1LQ52LC2 224 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 SLC26A9Q7LBE3 791 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 OTOAQ7RTW8 1153 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 LRRC49Q8IUZ0 686 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 TNIP2Q8NFZ5 429 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 UCMAQ8WVF2 138 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 PRCCQ92733 491 aaPredicted RBP17.87■□□□□ 0.45
SCARB2-223ENST00000640640 INPP5DQ92835 1189 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 CCT7Q99832 543 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 MID1IP1Q9NPA3 183 aa17.87■□□□□ 0.45
SCARB2-223ENST00000640640 ATP5BP06576 529 aaKnown RBP17.86■□□□□ 0.45
SCARB2-223ENST00000640640 HSPA13P48723 471 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 PSEN1P49768 467 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 WLSQ5T9L3 541 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 VPS50Q96JG6 964 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 CAAP1Q9H8G2 361 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 TMEM39AQ9NV64 488 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 MAGEA13PA6NCF6 341 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 FZD9O00144 591 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 BUD23O43709 281 aaKnown RBP17.86■□□□□ 0.45
SCARB2-223ENST00000640640 TBC1D4O60343 1298 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 SDHAF4Q5VUM1 108 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 PACS2Q86VP3 889 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 C12orf50Q8NA57 414 aaPredicted RBP17.86■□□□□ 0.45
SCARB2-223ENST00000640640 GMLQ99445 158 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 ALBP02768 609 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 CCDC15Q0P6D6 951 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 PLD1Q13393 1074 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 RNF43Q68DV7 783 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 RNF148Q8N7C7 305 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 CPT1BQ92523 772 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 ZNF516Q92618 1163 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 THAP11Q96EK4 314 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 FCRL2Q96LA5 508 aaPredicted RBP17.86■□□□□ 0.45
SCARB2-223ENST00000640640 FTHL17Q9BXU8 183 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 UXTQ9UBK9 157 aaPredicted RBP17.86■□□□□ 0.45
SCARB2-223ENST00000640640 ADGRA3Q8IWK6 1321 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 MEI4A8MW99 385 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 SNX30Q5VWJ9 437 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 DLK2Q6UY11 383 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 SNX32Q86XE0 403 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 OR9Q1Q8NGQ5 310 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 FAM50BQ9Y247 325 aa17.86■□□□□ 0.45
SCARB2-223ENST00000640640 RGPD5Q99666 1765 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 AGPSO00116 658 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 VNN1O95497 513 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 PROCP04070 461 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 SMPD1P17405 629 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 CHADLQ6NUI6 762 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 C16orf87Q6PH81 154 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 IZUMO2Q6UXV1 221 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 ANKS3Q6ZW76 656 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 C16orf59Q7L2K0 433 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 HOMEZQ8IX15 550 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 ZNF398Q8TD17 642 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 FBXL18Q96ME1 805 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 PPP1R10Q96QC0 940 aaKnown RBP17.85■□□□□ 0.45
SCARB2-223ENST00000640640 ACOX2Q99424 681 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 ELOVL6Q9H5J4 265 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 GOLGA4Q13439 2230 aaKnown RBP17.85■□□□□ 0.45
SCARB2-223ENST00000640640 KANSL1LA0AUZ9 987 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 C22orf31O95567 290 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 GUCA1CO95843 209 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 SKIV2L2P42285 1042 aaKnown RBP17.85■□□□□ 0.45
SCARB2-223ENST00000640640 RPL14P50914 215 aaKnown RBP17.85■□□□□ 0.45
SCARB2-223ENST00000640640 DDR2Q16832 855 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms