RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 OTOGLQ3ZCN5 2332 aa27.39■■□□□ 1.97
VEGFA-231ENST00000640499 PLXND1Q9Y4D7 1925 aa27.38■■□□□ 1.97
VEGFA-231ENST00000640499 ILVBLA1L0T0 632 aa27.38■■□□□ 1.97
VEGFA-231ENST00000640499 SYNCRIPO60506 623 aaKnown RBP27.38■■□□□ 1.97
VEGFA-231ENST00000640499 MT-CO1P00395 513 aa27.38■■□□□ 1.97
VEGFA-231ENST00000640499 VASPP50552 380 aaPredicted RBP27.38■■□□□ 1.97
VEGFA-231ENST00000640499 PIGHQ14442 188 aaPredicted RBP27.38■■□□□ 1.97
VEGFA-231ENST00000640499 STARD3Q14849 445 aa27.38■■□□□ 1.97
VEGFA-231ENST00000640499 HNRNPA1L2Q32P51 320 aaKnown RBP27.38■■□□□ 1.97
VEGFA-231ENST00000640499 C9orf64Q5T6V5 341 aa27.38■■□□□ 1.97
VEGFA-231ENST00000640499 PGBD3Q8N328 593 aa27.38■■□□□ 1.97
VEGFA-231ENST00000640499 FRS2Q8WU20 508 aa27.38■■□□□ 1.97
VEGFA-231ENST00000640499 KCTD15Q96SI1 283 aaPredicted RBP27.38■■□□□ 1.97
VEGFA-231ENST00000640499 MUC3BQ9H195 1237 aa27.38■■□□□ 1.97
VEGFA-231ENST00000640499 IP6K2Q9UHH9 426 aa27.38■■□□□ 1.97
VEGFA-231ENST00000640499 DNAI1Q9UI46 699 aa27.38■■□□□ 1.97
VEGFA-231ENST00000640499 CREB3O43889 395 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 ZMPSTE24O75844 475 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 LCA5LO95447 670 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 VAV1P15498 845 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 ACVRL1P37023 503 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 GNA12Q03113 381 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 SULT2A1Q06520 285 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 ZNF783Q6ZMS7 281 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 TMPRSS6Q8IU80 811 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 OR2T3Q8NH03 318 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 CTNNBL1Q8WYA6 563 aaPredicted RBP27.37■■□□□ 1.97
VEGFA-231ENST00000640499 ZC3H10Q96K80 434 aaKnown RBP27.37■■□□□ 1.97
VEGFA-231ENST00000640499 DUSP15Q9H1R2 295 aaPredicted RBP27.37■■□□□ 1.97
VEGFA-231ENST00000640499 DHX35Q9H5Z1 703 aaKnown RBP27.37■■□□□ 1.97
VEGFA-231ENST00000640499 RETREG1Q9H6L5 497 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 CTTNBP2NLQ9P2B4 639 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 UVRAGQ9P2Y5 699 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 VPS51Q9UID3 782 aa27.37■■□□□ 1.97
VEGFA-231ENST00000640499 SDK1Q7Z5N4 2213 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 WASH4PA8MWX3 477 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 PRPSAP2O60256 369 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 GFRA3O60609 400 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 SIN3BO75182 1162 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 DESP17661 470 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 EPHB2P29323 1055 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 CDC25BP30305 580 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 SLC25A11Q02978 314 aaKnown RBP27.36■■□□□ 1.97
VEGFA-231ENST00000640499 PLK5Q496M5 336 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 USP39Q53GS9 565 aaKnown RBP27.36■■□□□ 1.97
VEGFA-231ENST00000640499 PRR23BQ6ZRT6 265 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 RTL3Q8N8U3 475 aaKnown RBP27.36■■□□□ 1.97
VEGFA-231ENST00000640499 PTPRN2Q92932 1015 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 PPP1R9BQ96SB3 815 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 ACE2Q9BYF1 805 aaPredicted RBP27.36■■□□□ 1.97
VEGFA-231ENST00000640499 PRDM16Q9HAZ2 1276 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 SUN2Q9UH99 717 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 PIEZO1Q92508 2521 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 SPAG17Q6Q759 2223 aa27.36■■□□□ 1.97
VEGFA-231ENST00000640499 MYO1FO00160 1098 aa27.35■■□□□ 1.97
VEGFA-231ENST00000640499 CD160O95971 181 aa27.35■■□□□ 1.97
VEGFA-231ENST00000640499 MAPKAPK2P49137 400 aa27.35■■□□□ 1.97
VEGFA-231ENST00000640499 ST8SIA6P61647 398 aa27.35■■□□□ 1.97
VEGFA-231ENST00000640499 KCNT1Q5JUK3 1230 aa27.35■■□□□ 1.97
VEGFA-231ENST00000640499 CEP68Q76N32 757 aa27.35■■□□□ 1.97
VEGFA-231ENST00000640499 PSTKQ8IV42 348 aaKnown RBP27.35■■□□□ 1.97
VEGFA-231ENST00000640499 DCAF4L2Q8NA75 395 aa27.35■■□□□ 1.97
VEGFA-231ENST00000640499 SLC35G2Q8TBE7 412 aa27.35■■□□□ 1.97
VEGFA-231ENST00000640499 ARHGEF2Q92974 986 aaKnown RBP27.35■■□□□ 1.97
VEGFA-231ENST00000640499 ACTL7AQ9Y615 435 aa27.35■■□□□ 1.97
VEGFA-231ENST00000640499 RIF1Q5UIP0 2472 aaKnown RBP27.35■■□□□ 1.97
VEGFA-231ENST00000640499 K7ERQ8 282 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 ATP9BO43861 1147 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 RARAP10276 462 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 HOXD11P31277 338 aaPredicted RBP27.34■■□□□ 1.97
VEGFA-231ENST00000640499 ARF5P84085 180 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 KIAA1324Q6UXG2 1013 aaKnown RBP27.34■■□□□ 1.97
VEGFA-231ENST00000640499 LINGO4Q6UY18 593 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 METTL3Q86U44 580 aaKnown RBP27.34■■□□□ 1.97
VEGFA-231ENST00000640499 DCLK2Q8N568 766 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 SH2D3CQ8N5H7 860 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 FAM129BQ96TA1 746 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 EPAS1Q99814 870 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 NCAPGQ9BPX3 1015 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 SPON2Q9BUD6 331 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 KLC2Q9H0B6 622 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 ITM2CQ9NQX7 267 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 TFR2Q9UP52 801 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 HS3ST2Q9Y278 367 aa27.34■■□□□ 1.97
VEGFA-231ENST00000640499 IGHV1OR15-9A0A0B4J2B8 117 aa27.33■■□□□ 1.97
VEGFA-231ENST00000640499 SOWAHDA6NJG2 315 aa27.33■■□□□ 1.97
VEGFA-231ENST00000640499 SMAD6O43541 496 aaKnown RBP27.33■■□□□ 1.97
VEGFA-231ENST00000640499 PROSCO94903 275 aa27.33■■□□□ 1.97
VEGFA-231ENST00000640499 RPS14P62263 151 aaKnown RBP27.33■■□□□ 1.97
VEGFA-231ENST00000640499 SMTNL2Q2TAL5 461 aa27.33■■□□□ 1.97
VEGFA-231ENST00000640499 TMEM139Q8IV31 216 aa27.33■■□□□ 1.97
VEGFA-231ENST00000640499 SPC24Q8NBT2 197 aa27.33■■□□□ 1.97
VEGFA-231ENST00000640499 RSPH9Q9H1X1 276 aaPredicted RBP27.33■■□□□ 1.97
VEGFA-231ENST00000640499 ZWILCHQ9H900 591 aa27.33■■□□□ 1.97
VEGFA-231ENST00000640499 CWC15Q9P013 229 aaKnown RBP27.33■■□□□ 1.97
VEGFA-231ENST00000640499 USP36Q9P275 1121 aaKnown RBP27.33■■□□□ 1.97
VEGFA-231ENST00000640499 INTUQ9ULD6 942 aa27.33■■□□□ 1.97
VEGFA-231ENST00000640499 NYNRINQ9P2P1 1898 aaKnown RBP27.32■■□□□ 1.96
VEGFA-231ENST00000640499 TARSL2A2RTX5 802 aaKnown RBP27.32■■□□□ 1.96
VEGFA-231ENST00000640499 MTA2O94776 668 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms