RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.33□□□□□ -0.28
UBE3A-228ENST00000638155 AP4E1Q9UPM8 1137 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 PTPN5P54829 565 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 NR1H2P55055 460 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 FNBP1LQ5T0N5 605 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 TCEAL6Q6IPX3 200 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 AFTPHQ6ULP2 937 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 TBATAQ96M53 351 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 RAVER2Q9HCJ3 691 aaKnown RBP13.33□□□□□ -0.28
UBE3A-228ENST00000638155 BARHL2Q9NY43 387 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 KDM4BO94953 1096 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 MSL3P1P0C860 447 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 IER5Q5VY09 327 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 BORCS5Q969J3 196 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 DDX20Q9UHI6 824 aaKnown RBP13.33□□□□□ -0.28
UBE3A-228ENST00000638155 LAMC1P11047 1609 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 PTX3P26022 381 aaPredicted RBP13.33□□□□□ -0.28
UBE3A-228ENST00000638155 ZNF234Q14588 700 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 CDKL4Q5MAI5 379 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 FMR1NBQ8N0W7 255 aaPredicted RBP13.33□□□□□ -0.28
UBE3A-228ENST00000638155 OR2L3Q8NG85 312 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 PCDH19Q8TAB3 1148 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 CDK5RAP1Q96SZ6 601 aaKnown RBP13.33□□□□□ -0.28
UBE3A-228ENST00000638155 ZFYVE28Q9HCC9 887 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 MYO5CQ9NQX4 1742 aa13.33□□□□□ -0.28
UBE3A-228ENST00000638155 SNAP23O00161 211 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 C9P02748 559 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 SERPINF2P08697 491 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 CYP2C8P10632 490 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 ADAM17P78536 824 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 NT5DC3Q86UY8 548 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 TRNT1Q96Q11 434 aaKnown RBP13.32□□□□□ -0.28
UBE3A-228ENST00000638155 AASDHPPTQ9NRN7 309 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 TRNAU1APQ9NX07 287 aaKnown RBP13.32□□□□□ -0.28
UBE3A-228ENST00000638155 MSH4O15457 936 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 PPM1BO75688 479 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 PIK3CGP48736 1102 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 ACOT2P49753 483 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 MECP2P51608 486 aaKnown RBP13.32□□□□□ -0.28
UBE3A-228ENST00000638155 DEFA5Q01523 94 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 FOXP4Q8IVH2 680 aaPredicted RBP13.32□□□□□ -0.28
UBE3A-228ENST00000638155 TMEM8AQ9HCN3 771 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 TRIM38O00635 465 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 AKAP8O43823 692 aaKnown RBP13.32□□□□□ -0.28
UBE3A-228ENST00000638155 MTA2O94776 668 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 CRABP2P29373 138 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 ECHS1P30084 290 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 LSM3P62310 102 aaKnown RBP13.32□□□□□ -0.28
UBE3A-228ENST00000638155 STK32AQ8WU08 396 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 C11orf24Q96F05 449 aaPredicted RBP13.32□□□□□ -0.28
UBE3A-228ENST00000638155 WRNIP1Q96S55 665 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 DMGDHQ9UI17 866 aaKnown RBP13.32□□□□□ -0.28
UBE3A-228ENST00000638155 C3orf18Q9UK00 162 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 KIAA1257Q9ULG3 409 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 MYH3P11055 1940 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 A0A1B0GTH6 734 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 MAGEB16A2A368 324 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 SLC26A4O43511 780 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 LTFP02788 710 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 POLD2P49005 469 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 PYDC1Q8WXC3 89 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 PNPLA3Q9NST1 481 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 COX7A2P14406 83 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 RHEBQ15382 184 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 GALNT18Q6P9A2 607 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 CMTR2Q8IYT2 770 aaKnown RBP13.32□□□□□ -0.28
UBE3A-228ENST00000638155 ARMC10Q8N2F6 343 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 CCDC167Q9P0B6 97 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 ANKARQ7Z5J8 1434 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 MROH7-TTC4A0A0A0MT08 1334 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 FAM240BA0A1B0GVZ2 78 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 RRN3P2A6NIE6 340 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 MAFIPQ8WZ33 124 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 HPDLQ96IR7 371 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 KLHL5Q96PQ7 755 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 RHOBTB3O94955 611 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 S100A3P33764 101 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 IL13P35225 146 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 TCEA2Q15560 299 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 ZNF549Q6P9A3 640 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 ANGPT4Q9Y264 503 aa13.32□□□□□ -0.28
UBE3A-228ENST00000638155 NOL4O94818 638 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 HUNKP57058 714 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 DGLUCYQ7Z3D6 616 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 TRMT11Q7Z4G4 463 aaKnown RBP13.31□□□□□ -0.28
UBE3A-228ENST00000638155 SLC26A11Q86WA9 606 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 HERC6Q8IVU3 1022 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 SRFBP1Q8NEF9 429 aaKnown RBP13.31□□□□□ -0.28
UBE3A-228ENST00000638155 PHF21BQ96EK2 531 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 ASB2Q96Q27 587 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 ZNF471Q9BX82 626 aaPredicted RBP13.31□□□□□ -0.28
UBE3A-228ENST00000638155 DNAJC11Q9NVH1 559 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 TTC34A8MYJ7 566 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 CASKO14936 926 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 EYA4O95677 639 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 SERPINE1P05121 402 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 FAM153BP0C7A2 387 aa13.31□□□□□ -0.28
UBE3A-228ENST00000638155 MRPS22P82650 360 aaKnown RBP13.31□□□□□ -0.28
UBE3A-228ENST00000638155 ROR2Q01974 943 aaKnown RBP13.31□□□□□ -0.28
UBE3A-228ENST00000638155 ILF3Q12906 894 aaKnown RBP eCLIP13.31□□□□□ -0.287e-11■■■■□ 22.7
Retrieved 100 of 20,778 RNA–protein pairs in 283.6 ms