RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 TBC1D3DA0A087WVF3 549 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TBC1D3IA0A087WXS9 549 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TBC1D3EA0A087X179 549 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TBC1D3KA0A087X1G2 549 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TBC1D3FA6NER0 549 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TBC1D3LB9A6J9 549 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TBC1D3HP0C7X1 549 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 FDFT1P37268 417 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TBC1D3GQ6DHY5 549 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TBC1D3CQ6IPX1 549 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TBC1D3Q8IZP1 549 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 RASGEF1AQ8N9B8 481 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 MARK4Q96L34 752 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 COPS4Q9BT78 406 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 COPG2Q9UBF2 871 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 PCDHGB3Q9Y5G1 929 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 SCAMP1O15126 338 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TPH1P17752 444 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 RPS6KA3P51812 740 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 PLK1P53350 603 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 CYB5D1Q6P9G0 228 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 PROX1Q92786 737 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 DDX43Q9NXZ2 648 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 PTPN9P43378 593 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 HSPA13P48723 471 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 NAB2Q15742 525 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 ZNF613Q6PF04 617 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 EPS8L2Q9H6S3 715 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 SIRPGQ9P1W8 387 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 TFR2Q9UP52 801 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 SNX4O95219 450 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 OR5F1O95221 314 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 GEMIN4P57678 1058 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 LSM3P62310 102 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 MILR1Q7Z6M3 343 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 ATP8B4Q8TF62 1192 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 RFX7Q2KHR2 1363 aa16.59■□□□□ 0.25
CACNA1A-258ENST00000638029 A0A088AWK7 358 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 O00370 1275 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 ATP9AO75110 1047 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 ZNF10P21506 573 aaPredicted RBP16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 HPCAL1P37235 193 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 IKBIPQ70UQ0 350 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 ISM1B1AKI9 464 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 MATN4O95460 622 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 IFNA14P01570 189 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 DPEP1P16444 411 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 MUTP22033 750 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 TRAF3Q13114 568 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 RIN1Q13671 783 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 LY6KQ17RY6 165 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 KBTBD12Q3ZCT8 623 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 SPANXN2Q5MJ10 180 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 TTLL2Q9BWV7 592 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 OSBPL2Q9H1P3 480 aa16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 EPB41L4AQ9HCS5 686 aaPredicted RBP16.58■□□□□ 0.25
CACNA1A-258ENST00000638029 CCDC166P0CW27 439 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 CCNA2P20248 432 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 PFKPQ01813 784 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 C15orf59Q2T9L4 293 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 C11orf63Q6NUN7 778 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 EPB41L4BQ9H329 900 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 SERPINA13PQ6UXR4 307 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 RASSF1Q9NS23 344 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 MRPS23Q9Y3D9 190 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 SF3B1O75533 1304 aaKnown RBP eCLIP16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 ADGRA3Q8IWK6 1321 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 MAFKO60675 156 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 GEMP55040 296 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 SNRPFP62306 86 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 ZNF615Q8N8J6 731 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 CCDC126Q96EE4 140 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 NIF3L1Q9GZT8 377 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 TBX20Q9UMR3 447 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 CAMSAP1Q5T5Y3 1602 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 CRB1P82279 1406 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 RAD51BO15315 384 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 NTRK1P04629 796 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 NR3C2P08235 984 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 OR56A5P0C7T3 313 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 ACADSP16219 412 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 ZMYND11Q15326 602 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 CDC42EP5Q6NZY7 148 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 LGI2Q8N0V4 545 aa16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 CENPIQ92674 756 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-258ENST00000638029 PTPN5P54829 565 aa16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 ELOAQ14241 798 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 SEL1L3Q68CR1 1132 aa16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 ZNF280DQ6N043 979 aa16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 CHST13Q8NET6 341 aa16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 ATL1Q8WXF7 558 aa16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 INTS7Q9NVH2 962 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 A0A0B4J269 797 aa16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 ATP5BP06576 529 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 STX5Q13190 355 aa16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 TFDP3Q5H9I0 405 aa16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 RNF148Q8N7C7 305 aa16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 SGSM3Q96HU1 749 aa16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 PLGP00747 810 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-258ENST00000638029 TLX1P31314 330 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms