RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ACTR8Q9H981 624 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 TSR3Q9UJK0 312 aaKnown RBP15.34■□□□□ 0.05
UBE3A-227ENST00000638011 GRIP1Q9Y3R0 1128 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 RPLP2P05387 115 aaKnown RBP15.34■□□□□ 0.05
UBE3A-227ENST00000638011 IDO1P14902 403 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 ANO7Q6IWH7 933 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 KIAA1683Q9H0B3 1180 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 PUS7LQ9H0K6 701 aaKnown RBP15.34■□□□□ 0.05
UBE3A-227ENST00000638011 PRR29P0C7W0 189 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 PHF20Q9BVI0 1012 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 TAS2R13Q9NYV9 303 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 USP18Q9UMW8 372 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 ANPEPP15144 967 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 HIPK1Q86Z02 1210 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 DHRS12A0PJE2 317 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 TMPRSS11AQ6ZMR5 421 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 ZNF655Q8N720 491 aaPredicted RBP15.34■□□□□ 0.05
UBE3A-227ENST00000638011 XPR1Q9UBH6 696 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 TPRP12270 2363 aaKnown RBP15.34■□□□□ 0.05
UBE3A-227ENST00000638011 KMOO15229 486 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 DCXO43602 365 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 IFNA6P05013 189 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 IDH2P48735 452 aaKnown RBP15.34■□□□□ 0.05
UBE3A-227ENST00000638011 DNAJB7Q7Z6W7 309 aaPredicted RBP15.34■□□□□ 0.05
UBE3A-227ENST00000638011 KDM6AO15550 1401 aaPredicted RBP15.34■□□□□ 0.05
UBE3A-227ENST00000638011 MRASO14807 208 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 PLEKHA8P1O95397 391 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 NMT1P30419 496 aaKnown RBP15.34■□□□□ 0.05
UBE3A-227ENST00000638011 HNF4AP41235 474 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 TTC7BQ86TV6 843 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 SERAC1Q96JX3 654 aa15.34■□□□□ 0.05
UBE3A-227ENST00000638011 MCCC1Q96RQ3 725 aaPredicted RBP15.34■□□□□ 0.05
UBE3A-227ENST00000638011 A2ML1A8K2U0 1454 aa15.33■□□□□ 0.05
UBE3A-227ENST00000638011 SORBS3O60504 671 aa15.33■□□□□ 0.05
UBE3A-227ENST00000638011 NPTXRO95502 500 aa15.33■□□□□ 0.05
UBE3A-227ENST00000638011 MLYCDO95822 493 aa15.33■□□□□ 0.05
UBE3A-227ENST00000638011 FOLH1Q04609 750 aa15.33■□□□□ 0.05
UBE3A-227ENST00000638011 GREM2Q9H772 168 aa15.33■□□□□ 0.05
UBE3A-227ENST00000638011 MARCH7Q9H992 704 aa15.33■□□□□ 0.05
UBE3A-227ENST00000638011 CCDC177Q9NQR7 707 aaPredicted RBP15.33■□□□□ 0.05
UBE3A-227ENST00000638011 ASTN2O75129 1339 aaPredicted RBP15.33■□□□□ 0.05
UBE3A-227ENST00000638011 BBIP1A8MTZ0 92 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 A1BGP04217 495 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 PTX3P26022 381 aaPredicted RBP15.33■□□□□ 0.04
UBE3A-227ENST00000638011 FRMD7Q6ZUT3 714 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 CCDC167Q9P0B6 97 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 TSHRP16473 764 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 PGAM1P18669 254 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 SOX11P35716 441 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 VMACQ2NL98 169 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 RDH11Q8TC12 318 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 AGAP11Q8TF27 550 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 NACC2Q96BF6 587 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 BTBD9Q96Q07 612 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 TCF12Q99081 682 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.33■□□□□ 0.044e-9■■■■□ 20.3
UBE3A-227ENST00000638011 TRPC4Q9UBN4 977 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 PSME2Q9UL46 239 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 SLC9A8Q9Y2E8 581 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 MTF2Q9Y483 593 aaPredicted RBP15.33■□□□□ 0.04
UBE3A-227ENST00000638011 RHEBQ15382 184 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 RFTN2Q52LD8 501 aaPredicted RBP15.33■□□□□ 0.04
UBE3A-227ENST00000638011 FBXO39Q8N4B4 442 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 CD101Q93033 1021 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 PHF12Q96QT6 1004 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 MAGEB3O15480 346 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 FCER1AP12319 257 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 BGNP21810 368 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 DCKP27707 260 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 IL18Q14116 193 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 RAD9BQ6WBX8 426 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 DHRS7Q9Y394 339 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 ESPL1Q14674 2120 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 FAM189A2Q15884 450 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 KLHDC7AQ5VTJ3 777 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 ZCCHC9Q8N567 271 aaKnown RBP15.33■□□□□ 0.04
UBE3A-227ENST00000638011 SMAD5Q99717 465 aaKnown RBP15.33■□□□□ 0.04
UBE3A-227ENST00000638011 AFF2P51816 1311 aa15.33■□□□□ 0.04
UBE3A-227ENST00000638011 FBXO21O94952 628 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 ABHD2P08910 425 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 ITGALP20701 1170 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 ARFIP1P53367 373 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 ACAP1Q15027 740 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 PNMA8BQ9ULN7 279 aaPredicted RBP15.32■□□□□ 0.04
UBE3A-227ENST00000638011 DOLKQ9UPQ8 538 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 KLRC1P26715 233 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 BIKQ13323 160 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 PAGE2BQ5JRK9 111 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 OFCC1Q8IZS5 231 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 LRRC4BQ9NT99 713 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 TCP10L2B9ZVM9 353 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 TGDSO95455 350 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 SNRPB2P08579 225 aaKnown RBP15.32■□□□□ 0.04
UBE3A-227ENST00000638011 TIE1P35590 1138 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 RPL14P50914 215 aaKnown RBP15.32■□□□□ 0.04
UBE3A-227ENST00000638011 ILF3Q12906 894 aaKnown RBP eCLIP15.32■□□□□ 0.047e-11■■■■□ 22.7
UBE3A-227ENST00000638011 EPHA7Q15375 998 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 FAM131AQ6UXB0 335 aa15.32■□□□□ 0.04
UBE3A-227ENST00000638011 PTCD2Q8WV60 388 aaKnown RBP15.32■□□□□ 0.04
UBE3A-227ENST00000638011 ZNF408Q9H9D4 720 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms