RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 ATPAF2Q8N5M1 289 aa21.58■■□□□ 1.04
CLN8-213ENST00000637156 TMA16Q96EY4 203 aaKnown RBP21.58■■□□□ 1.04
CLN8-213ENST00000637156 FERMT1Q9BQL6 677 aa21.58■■□□□ 1.04
CLN8-213ENST00000637156 TXLNGYQ9BZA5 131 aa21.58■■□□□ 1.04
CLN8-213ENST00000637156 DZANK1Q9NVP4 752 aa21.58■■□□□ 1.04
CLN8-213ENST00000637156 MTRF1LQ9UGC7 380 aaKnown RBP21.58■■□□□ 1.04
CLN8-213ENST00000637156 IPO11Q9UI26 975 aaKnown RBP21.58■■□□□ 1.04
CLN8-213ENST00000637156 DOCK4Q8N1I0 1966 aa21.58■■□□□ 1.04
CLN8-213ENST00000637156 EYSQ5T1H1 3165 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 A0A0D9SEW6 157 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 E2F8A0AVK6 867 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 MATN3O15232 486 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 RAMP2O60895 175 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 TNNT3P45378 269 aaPredicted RBP21.57■■□□□ 1.04
CLN8-213ENST00000637156 YBEYP58557 167 aaPredicted RBP21.57■■□□□ 1.04
CLN8-213ENST00000637156 GAD2Q05329 585 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 DHX9Q08211 1270 aaKnown RBP21.57■■□□□ 1.04
CLN8-213ENST00000637156 ZBTB17Q13105 803 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 CASP8Q14790 479 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 LRIT3Q3SXY7 679 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 SYCP2LQ5T4T6 812 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 FAXCQ5TGI0 409 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 C4orf22Q6V702 233 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 PID1Q7Z2X4 250 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 GPR149Q86SP6 731 aa21.57■■□□□ 1.04
CLN8-213ENST00000637156 PRCCQ92733 491 aaPredicted RBP21.57■■□□□ 1.04
CLN8-213ENST00000637156 J3KR12 359 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 MTSS1O43312 755 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 PEX11BO96011 259 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 JCHAINP01591 159 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 TMC3Q7Z5M5 1100 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 CNTD1Q8N815 330 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 TSEN2Q8NCE0 465 aaKnown RBP21.56■■□□□ 1.04
CLN8-213ENST00000637156 ZMYM5Q9UJ78 669 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 TBC1D30Q9Y2I9 924 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.56■■□□□ 1.04
CLN8-213ENST00000637156 A0A1B0GVM2 712 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 TCAF2A6NFQ2 919 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 ARHGAP42A6NI28 874 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 MAP2K7O14733 419 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 ZBTB24O43167 697 aaPredicted RBP21.56■■□□□ 1.04
CLN8-213ENST00000637156 OPHN1O60890 802 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 TBL1XO60907 577 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 CCNB1P14635 433 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 ACVRL1P37023 503 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 ZNF177Q13360 481 aaPredicted RBP21.56■■□□□ 1.04
CLN8-213ENST00000637156 ADAM15Q13444 863 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 PARP15Q460N3 678 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 ANKRD54Q6NXT1 300 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 ARHGEF18Q6ZSZ5 1173 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 CHST9Q7L1S5 443 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 HDXQ7Z353 690 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 CPXM2Q8N436 756 aa21.56■■□□□ 1.04
CLN8-213ENST00000637156 ZNF419Q96HQ0 510 aaPredicted RBP21.56■■□□□ 1.04
CLN8-213ENST00000637156 TTYH1Q9H313 450 aaPredicted RBP21.56■■□□□ 1.04
CLN8-213ENST00000637156 PPFIA2O75334 1257 aa21.55■■□□□ 1.04
CLN8-213ENST00000637156 STK10O94804 968 aaKnown RBP21.55■■□□□ 1.04
CLN8-213ENST00000637156 CD68P34810 354 aaPredicted RBP21.55■■□□□ 1.04
CLN8-213ENST00000637156 HSPA9P38646 679 aaKnown RBP21.55■■□□□ 1.04
CLN8-213ENST00000637156 NUMBP49757 651 aa21.55■■□□□ 1.04
CLN8-213ENST00000637156 SERINC3Q13530 473 aa21.55■■□□□ 1.04
CLN8-213ENST00000637156 KCNJ11Q14654 390 aa21.55■■□□□ 1.04
CLN8-213ENST00000637156 MREGQ8N565 214 aa21.55■■□□□ 1.04
CLN8-213ENST00000637156 ARHGEF2Q92974 986 aaKnown RBP21.55■■□□□ 1.04
CLN8-213ENST00000637156 TEKT5Q96M29 485 aa21.55■■□□□ 1.04
CLN8-213ENST00000637156 AGAP3Q96P47 875 aa21.55■■□□□ 1.04
CLN8-213ENST00000637156 VAT1Q99536 393 aa21.55■■□□□ 1.04
CLN8-213ENST00000637156 SHOC2Q9UQ13 582 aa21.55■■□□□ 1.04
CLN8-213ENST00000637156 ATP8A1Q9Y2Q0 1164 aa21.55■■□□□ 1.04
CLN8-213ENST00000637156 UNC80Q8N2C7 3258 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 GOLGA8MH3BSY2 632 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 ZNF189O75820 626 aaPredicted RBP21.54■■□□□ 1.04
CLN8-213ENST00000637156 TMEM63AO94886 807 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 GNA12Q03113 381 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 PARP6Q2NL67 630 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 FSCBQ5H9T9 825 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 C6orf118Q5T5N4 469 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 TTC39BQ5VTQ0 682 aaPredicted RBP21.54■■□□□ 1.04
CLN8-213ENST00000637156 CXorf57Q6NSI4 855 aaKnown RBP21.54■■□□□ 1.04
CLN8-213ENST00000637156 TPGS1Q6ZTW0 290 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 SETD3Q86TU7 594 aaPredicted RBP21.54■■□□□ 1.04
CLN8-213ENST00000637156 HOOK3Q86VS8 718 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 ZCCHC9Q8N567 271 aaKnown RBP21.54■■□□□ 1.04
CLN8-213ENST00000637156 TDRD5Q8NAT2 981 aaKnown RBP21.54■■□□□ 1.04
CLN8-213ENST00000637156 BHMTQ93088 406 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 LRRC3BQ96PB8 259 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 IL12RB2Q99665 862 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 MAGEH1Q9H213 219 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 LINC00597Q9H2U6 94 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 DNAJC17Q9NVM6 304 aaKnown RBP21.54■■□□□ 1.04
CLN8-213ENST00000637156 LMCD1Q9NZU5 365 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 CLEC1BQ9P126 229 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 KLHL8Q9P2G9 620 aaPredicted RBP21.54■■□□□ 1.04
CLN8-213ENST00000637156 TRHDEQ9UKU6 1024 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 CHADO15335 359 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 IFI35P80217 286 aaPredicted RBP21.54■■□□□ 1.04
CLN8-213ENST00000637156 GRIN2CQ14957 1233 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 ZNF77Q15935 545 aa21.54■■□□□ 1.04
CLN8-213ENST00000637156 TIGD7Q6NT04 549 aaPredicted RBP21.54■■□□□ 1.04
CLN8-213ENST00000637156 USP33Q8TEY7 942 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms