RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 FOSL1P15407 271 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 GCAP28676 217 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 GRIA1P42261 906 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 MYBPC3Q14896 1274 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 PARP6Q2NL67 630 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 RNF43Q68DV7 783 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 RFWD3Q6PCD5 774 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 CEP128Q6ZU80 1094 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 TAS1R1Q7RTX1 841 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 CROCCP2Q86T23 111 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 AGGF1Q8N302 714 aaeCLIP11.79□□□□□ -0.52
CLN6-217ENST00000636964 HTR3CQ8WXA8 447 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 DNAJC9Q8WXX5 260 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 AZIN2Q96A70 460 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 TTC25Q96NG3 672 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 SH3GL1Q99961 368 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 BEGAINQ9BUH8 593 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 PIH1D1Q9NWS0 290 aaKnown RBP11.79□□□□□ -0.52
CLN6-217ENST00000636964 NUP205Q92621 2012 aa11.79□□□□□ -0.52
CLN6-217ENST00000636964 A0A1W2PQH9 124 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 KCNK1O00180 336 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 DGKIO75912 1065 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 DPYSQ14117 519 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 ARL13BQ3SXY8 428 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 PABPC1LQ4VXU2 614 aaKnown RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 RSPO2Q6UXX9 243 aaPredicted RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 ARHGEF18Q6ZSZ5 1173 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 SCD5Q86SK9 330 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 PSTKQ8IV42 348 aaKnown RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 RTP4Q96DX8 246 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 VMP1Q96GC9 406 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 QKIQ96PU8 341 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLN6-217ENST00000636964 TRIM56Q9BRZ2 755 aaKnown RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 TBC1D10AQ9BXI6 508 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 KLC2Q9H0B6 622 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLN6-217ENST00000636964 OSER1Q9NX31 292 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 CDH16O75309 829 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 CXCR3P49682 368 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 SH3BGRP55822 239 aaPredicted RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 USP46P62068 366 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 TLE2Q04725 743 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.78□□□□□ -0.521e-6■■■■■ 32.3
CLN6-217ENST00000636964 TMCO2Q7Z6W1 182 aaPredicted RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 DCP1BQ8IZD4 617 aaKnown RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 FBF1Q8TES7 1133 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 IRGQQ8WZA9 623 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 CASP10Q92851 521 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 SLC35B4Q969S0 331 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 P2RY11Q96G91 374 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 OLFM3Q96PB7 478 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 STMN4Q9H169 189 aaPredicted RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 MARCH5Q9NX47 278 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 NLRC5Q86WI3 1866 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 TMEM189-UBE2V1I3L0A0 370 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 DCLK1O15075 740 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 MOCS2O96007 188 aaPredicted RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 F9P00740 461 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 CPB1P15086 417 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 TRIM60Q495X7 471 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 RWDD4Q6NW29 188 aaKnown RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 FAM47EQ6ZV65 393 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 C11orf96Q7Z7L8 435 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 LMNTD2Q8IXW0 634 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 VPS52Q8N1B4 723 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 NPWQ8N729 165 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 CFAP36Q96G28 342 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 CELF6Q96J87 481 aaKnown RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 TGS1Q96RS0 853 aaKnown RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 SAGE1Q9NXZ1 904 aa11.78□□□□□ -0.52
CLN6-217ENST00000636964 RCOR3Q9P2K3 495 aaPredicted RBP11.78□□□□□ -0.52
CLN6-217ENST00000636964 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.77□□□□□ -0.52
CLN6-217ENST00000636964 PITPNM1O00562 1244 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 NDC80O14777 642 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 CHADO15335 359 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 LRIG2O94898 1065 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 ABHD2P08910 425 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 TAC1P20366 129 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 FAAP100Q0VG06 881 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.77□□□□□ -0.52
CLN6-217ENST00000636964 KHDC1Q4VXA5 237 aaKnown RBP11.77□□□□□ -0.52
CLN6-217ENST00000636964 RTP2Q5QGT7 225 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 NEK10Q6ZWH5 1172 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 TAOK1Q7L7X3 1001 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 CAND1Q86VP6 1230 aaKnown RBP11.77□□□□□ -0.52
CLN6-217ENST00000636964 DIS3LQ8TF46 1054 aaKnown RBP11.77□□□□□ -0.52
CLN6-217ENST00000636964 DYDC1Q8WWB3 177 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 NTAN1Q96AB6 310 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 ERP27Q96DN0 273 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 PGAP3Q96FM1 320 aaPredicted RBP11.77□□□□□ -0.52
CLN6-217ENST00000636964 RABGEF1Q9UJ41 708 aa11.77□□□□□ -0.52
CLN6-217ENST00000636964 VWA8A3KMH1 1905 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 RASA4BC9J798 803 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 E7ESA3 106 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 RNF103O00237 685 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 RASA4O43374 803 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 GCATO75600 419 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 BRAFP15056 766 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms