RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 A0A0D9SEW6 157 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 TIMM44O43615 452 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 POLR2EP19388 210 aaKnown RBP16.4■□□□□ 0.22
CLN6-216ENST00000636876 ETFBP38117 255 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 DNA2P51530 1060 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 NDST2P52849 883 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 YBEYP58557 167 aaPredicted RBP16.4■□□□□ 0.22
CLN6-216ENST00000636876 COPS2P61201 443 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 FZD5Q13467 585 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 LRRC32Q14392 662 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 RPS6KA1Q15418 735 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 AFMIDQ63HM1 303 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 MBLAC2Q68D91 279 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 CWF19L1Q69YN2 538 aaKnown RBP16.4■□□□□ 0.22
CLN6-216ENST00000636876 CCDC50Q8IVM0 306 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 CCDC105Q8IYK2 499 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 SLC35F6Q8N357 371 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 C17orf53Q8N3J3 647 aaPredicted RBP16.4■□□□□ 0.22
CLN6-216ENST00000636876 LZTR1Q8N653 840 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 NPWQ8N729 165 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 PQLC3Q8N755 202 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 OR7D4Q8NG98 312 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 TTC17Q96AE7 1141 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 CIPCQ9C0C6 399 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 LRRC19Q9H756 370 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 LMAN1LQ9HAT1 526 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 PRDM16Q9HAZ2 1276 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 RBM12Q9NTZ6 932 aaKnown RBP16.4■□□□□ 0.22
CLN6-216ENST00000636876 VPS28Q9UK41 221 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 STARD13Q9Y3M8 1113 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 NUP205Q92621 2012 aa16.4■□□□□ 0.22
CLN6-216ENST00000636876 MYO18AQ92614 2054 aaKnown RBP16.39■□□□□ 0.21
CLN6-216ENST00000636876 hCG_1818297A0A087WSY0 165 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 PRR33A8MZF0 331 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 RASA4BC9J798 803 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 NCAM2O15394 837 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 RASA4O43374 803 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 CHRM1P11229 460 aaPredicted RBP16.39■□□□□ 0.21
CLN6-216ENST00000636876 MSNP26038 577 aaKnown RBP16.39■□□□□ 0.21
CLN6-216ENST00000636876 ACVRL1P37023 503 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 KIR2DL1P43626 348 aaPredicted RBP16.39■□□□□ 0.21
CLN6-216ENST00000636876 SEC13P55735 322 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 POLD3Q15054 466 aaPredicted RBP16.39■□□□□ 0.21
CLN6-216ENST00000636876 PPP2R5EQ16537 467 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 PARP15Q460N3 678 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 TFDP3Q5H9I0 405 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 NCBP2-AS2Q69YL0 99 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 RFX6Q8HWS3 928 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 ARHGAP12Q8IWW6 846 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 SYNPOQ8N3V7 929 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 DCAF4L2Q8NA75 395 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 CCDC26Q8TAB7 109 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 UCMAQ8WVF2 138 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 SORCS1Q8WY21 1168 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 ARHGEF2Q92974 986 aaKnown RBP16.39■□□□□ 0.21
CLN6-216ENST00000636876 CLDN23Q96B33 292 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 CELF6Q96J87 481 aaKnown RBP16.39■□□□□ 0.21
CLN6-216ENST00000636876 PSMB7Q99436 277 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 SPON2Q9BUD6 331 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 TLR10Q9BXR5 811 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 MAK16Q9BXY0 300 aaKnown RBP16.39■□□□□ 0.21
CLN6-216ENST00000636876 ZKSCAN5Q9Y2L8 839 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 SIT1Q9Y3P8 196 aa16.39■□□□□ 0.21
CLN6-216ENST00000636876 ATG2BQ96BY7 2078 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 KMT2EQ8IZD2 1858 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 ANTXRLA6NF34 631 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 RNF40O75150 1001 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 ASLP04424 464 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 ATP5BP06576 529 aaKnown RBP16.38■□□□□ 0.21
CLN6-216ENST00000636876 DLDP09622 509 aaKnown RBP16.38■□□□□ 0.21
CLN6-216ENST00000636876 PYGMP11217 842 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 KRT10P13645 584 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 PTPN7P35236 360 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 SERPINB6P35237 376 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 CETN2P41208 172 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 NUMBP49757 651 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 TFDP2Q14188 446 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 PAFAH1B3Q15102 231 aaKnown RBP16.38■□□□□ 0.21
CLN6-216ENST00000636876 EMC10Q5UCC4 262 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 DCAF12L1Q5VU92 463 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 SLC9A4Q6AI14 798 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 BMP8AQ7Z5Y6 402 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.38■□□□□ 0.21
CLN6-216ENST00000636876 USP33Q8TEY7 942 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 HMCESQ96FZ2 354 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 C2orf49Q9BVC5 232 aaPredicted RBP16.38■□□□□ 0.21
CLN6-216ENST00000636876 ACE2Q9BYF1 805 aaPredicted RBP16.38■□□□□ 0.21
CLN6-216ENST00000636876 ATP13A1Q9HD20 1204 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.38■□□□□ 0.21
CLN6-216ENST00000636876 VPS51Q9UID3 782 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 HCN2Q9UL51 889 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 JRKLQ9Y4A0 524 aa16.38■□□□□ 0.21
CLN6-216ENST00000636876 ARHGAP42A6NI28 874 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 APOL1O14791 398 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 MFSD11O43934 449 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 SNAP91O60641 907 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 ZMPSTE24O75844 475 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 HNRNPLP14866 589 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLN6-216ENST00000636876 ZFXP17010 805 aaPredicted RBP16.37■□□□□ 0.21
CLN6-216ENST00000636876 AOC1P19801 751 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms