RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CDH6P55285 790 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 GEMIN4P57678 1058 aaKnown RBP6.91□□□□□ -1.3
UPF3B-205ENST00000636792 YBEYP58557 167 aaPredicted RBP6.91□□□□□ -1.3
UPF3B-205ENST00000636792 ETF1P62495 437 aaKnown RBP6.91□□□□□ -1.3
UPF3B-205ENST00000636792 PRKCQQ04759 706 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 RUNX3Q13761 415 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 AUHQ13825 339 aaKnown RBP6.91□□□□□ -1.3
UPF3B-205ENST00000636792 DPYSQ14117 519 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 TFDP2Q14188 446 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 KRT81Q14533 505 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 DHCR24Q15392 516 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 RPS6KA1Q15418 735 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 TAZQ16635 292 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 ITPRIPL2Q3MIP1 535 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 PARP15Q460N3 678 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 SH3PXD2AQ5TCZ1 1133 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 NADSYN1Q6IA69 706 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 TANGO2Q6ICL3 276 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 FBXL22Q6P050 247 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 SLCO4C1Q6ZQN7 724 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 RFX8Q6ZV50 586 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 PHLDB2Q86SQ0 1253 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 CD163Q86VB7 1156 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 ETFBKMTQ8IXQ9 262 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 ZNF683Q8IZ20 524 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 ADGRG2Q8IZP9 1017 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 UMODL1-AS1Q8N2C9 162 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 PGBD3Q8N328 593 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 CCDC185Q8N715 623 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.91□□□□□ -1.3
UPF3B-205ENST00000636792 RTL3Q8N8U3 475 aaKnown RBP6.91□□□□□ -1.3
UPF3B-205ENST00000636792 KDM1BQ8NB78 822 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 CSGALNACT1Q8TDX6 532 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 FATE1Q969F0 183 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 TMA16Q96EY4 203 aaKnown RBP6.91□□□□□ -1.3
UPF3B-205ENST00000636792 PBKQ96KB5 322 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 BTBD6Q96KE9 485 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 RPGRIP1Q96KN7 1286 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 PRICKLE1Q96MT3 831 aaPredicted RBP6.91□□□□□ -1.3
UPF3B-205ENST00000636792 RPRD1AQ96P16 312 aaPredicted RBP6.91□□□□□ -1.3
UPF3B-205ENST00000636792 NAPGQ99747 312 aaPredicted RBP6.91□□□□□ -1.3
UPF3B-205ENST00000636792 IER2Q9BTL4 223 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 BRD8Q9H0E9 1235 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 BRD9Q9H8M2 597 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 ECT2Q9H8V3 914 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 PCDH18Q9HCL0 1135 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 GKN1Q9NS71 199 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 COX16Q9P0S2 106 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 TRIM10Q9UDY6 481 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 PCSK1NQ9UHG2 260 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 CDH22Q9UJ99 828 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 FBXO10Q9UK96 956 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 TBC1D30Q9Y2I9 924 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 HYOU1Q9Y4L1 999 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 MYO10Q9HD67 2058 aa6.91□□□□□ -1.3
UPF3B-205ENST00000636792 MYOFQ9NZM1 2061 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 hCG_1818297A0A087WSY0 165 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 ILVBLA1L0T0 632 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 LRRD1A4D1F6 860 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 TMEM110-MUSTN1A8MSY1 372 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 I6L893 689 aaPredicted RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 APOC4-APOC2K7ER74 178 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 MAN2B1O00754 1011 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 DCLK1O15075 740 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 DDX3YO15523 660 aaKnown RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 MTSS1O43312 755 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 TJP3O95049 919 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 APOC2P02655 101 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 ASLP04424 464 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 HMBSP08397 361 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 HOXD9P28356 352 aaPredicted RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 GDI1P31150 447 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 SLC6A4P31645 630 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 VIPR2P41587 438 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 CDKN2BP42772 138 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 MAGEA9P43362 315 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 PLK1P53350 603 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 ATXN1P54253 815 aaKnown RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 TAS2R40P59535 323 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 TFF2Q03403 129 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 SULT2A1Q06520 285 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 CDH18Q13634 790 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 DPYSL3Q14195 570 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 PAFAH1B3Q15102 231 aaKnown RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 SMTNL2Q2TAL5 461 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 HSF5Q4G112 596 aaPredicted RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 FBXO43Q4G163 708 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 ZNF569Q5MCW4 686 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 LY6G5CQ5SRR4 150 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 ZFYVE27Q5T4F4 411 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 FYB2Q5VWT5 728 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 PAPD7Q5XG87 772 aaKnown RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 RAP1GAP2Q684P5 730 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 SLC9A4Q6AI14 798 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 TMCO3Q6UWJ1 677 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 SPOCD1Q6ZMY3 1216 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 BBS12Q6ZW61 710 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 NLRP14Q86W24 1093 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 MFN1Q8IWA4 741 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 LGI2Q8N0V4 545 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms