RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 SLC20A1Q8WUM9 679 aa19.48■□□□□ 0.71
CLN6-213ENST00000636212 PTPRN2Q92932 1015 aa19.48■□□□□ 0.71
CLN6-213ENST00000636212 CFAP57Q96MR6 1250 aa19.48■□□□□ 0.71
CLN6-213ENST00000636212 HAPLN3Q96S86 360 aa19.48■□□□□ 0.71
CLN6-213ENST00000636212 FAM129BQ96TA1 746 aa19.48■□□□□ 0.71
CLN6-213ENST00000636212 NEUROG2Q9H2A3 272 aa19.48■□□□□ 0.71
CLN6-213ENST00000636212 TM9SF3Q9HD45 589 aa19.48■□□□□ 0.71
CLN6-213ENST00000636212 METTL5Q9NRN9 209 aaKnown RBP19.48■□□□□ 0.71
CLN6-213ENST00000636212 LAMA1P25391 3075 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 A0A1B0GVT2 93 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 C1QTNF3-AMACRE9PGA6 284 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 CYP1A1P04798 512 aaPredicted RBP19.47■□□□□ 0.71
CLN6-213ENST00000636212 CCDC172P0C7W6 258 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 ZNF883P0CG24 379 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 TFE3P19532 575 aaPredicted RBP19.47■□□□□ 0.71
CLN6-213ENST00000636212 SDC4P31431 198 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 GRIA4P48058 902 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 GALCP54803 685 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 SUZ12Q15022 739 aaKnown RBP19.47■□□□□ 0.71
CLN6-213ENST00000636212 HLA-BQ31612 363 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 NAXDQ8IW45 347 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 OR14C36Q8NHC7 312 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 TMEM59LQ9UK28 342 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 SIK3Q9Y2K2 1263 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 GON4LQ3T8J9 2241 aa19.47■□□□□ 0.71
CLN6-213ENST00000636212 SPAARA0A1B0GVQ0 90 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 E9PAM4 449 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 ALOX15BO15296 676 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 ATP9BO43861 1147 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 SH3BP5O60239 455 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 SRGAP2O75044 1071 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 GJB3O75712 270 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 CNTN5O94779 1100 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 TRIM16O95361 564 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 MMP8P22894 467 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 OR1E1P30953 314 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 IRAK1P51617 712 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 C21orf59P57076 290 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 ATP11AP98196 1134 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 FMO1Q01740 532 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 DLG2Q15700 870 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 NCEH1Q6PIU2 408 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 FAM131BQ86XD5 332 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 C1orf216Q8TAB5 229 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 SETD7Q8WTS6 366 aaKnown RBP19.46■□□□□ 0.71
CLN6-213ENST00000636212 ALG14Q96F25 216 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 C11orf70Q9BRQ4 267 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 ADAM33Q9BZ11 813 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 TM7SF3Q9NS93 570 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 SEPT11Q9NVA2 429 aaKnown RBP19.46■□□□□ 0.71
CLN6-213ENST00000636212 ANKRD6Q9Y2G4 727 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 SPTBN2O15020 2390 aa19.46■□□□□ 0.71
CLN6-213ENST00000636212 A0A1W2PPC4 97 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 DRGXA6NNA5 263 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 EPHB6O15197 1021 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 BNIP3LO60238 219 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 CALB1P05937 261 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 RACK1P63244 317 aaKnown RBP19.45■□□□□ 0.7
CLN6-213ENST00000636212 TYRO3Q06418 890 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 CCDC15Q0P6D6 951 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 TRIP6Q15654 476 aaKnown RBP19.45■□□□□ 0.7
CLN6-213ENST00000636212 ALFQ53S48 1182 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 SLC45A4Q5BKX6 768 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.45■□□□□ 0.7
CLN6-213ENST00000636212 TFAP2DQ7Z6R9 452 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 SH2D3CQ8N5H7 860 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 AOPEPQ8N6M6 819 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 ATP11CQ8NB49 1132 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 SLC30A5Q8TAD4 765 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 FRS2Q8WU20 508 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 ERGIC2Q96RQ1 377 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 SELENOOQ9BVL4 669 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 ACE2Q9BYF1 805 aaPredicted RBP19.45■□□□□ 0.7
CLN6-213ENST00000636212 ZYG11BQ9C0D3 744 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 ADAM22Q9P0K1 906 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 SERGEFQ9UGK8 458 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 OR51B4Q9Y5P0 310 aa19.45■□□□□ 0.7
CLN6-213ENST00000636212 TBC1D3DA0A087WVF3 549 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 TBC1D3IA0A087WXS9 549 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 TBC1D3EA0A087X179 549 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 TBC1D3KA0A087X1G2 549 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 ANKRD62A6NC57 917 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 TBC1D3FA6NER0 549 aaPredicted RBP19.44■□□□□ 0.7
CLN6-213ENST00000636212 LRRC10BA6NIK2 292 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 SMTNL1A8MU46 457 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 TBC1D3LB9A6J9 549 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 SLC7A4O43246 635 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 DFNA5O60443 496 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 TBC1D3HP0C7X1 549 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 KRT3P12035 628 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 VAV1P15498 845 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 DESP17661 470 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 CHRNB2P17787 502 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 CCR5P51681 352 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 ST3GAL2Q16842 350 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 CDO1Q16878 200 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 ZNF423Q2M1K9 1284 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 TBC1D3GQ6DHY5 549 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 TBC1D3CQ6IPX1 549 aa19.44■□□□□ 0.7
CLN6-213ENST00000636212 ZNF783Q6ZMS7 281 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms