RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 TMEM248Q9NWD8 314 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 CLEC4EQ9ULY5 219 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 ERICH4A6NGS2 130 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 WASH4PA8MWX3 477 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 GOLGA8KD6RF30 607 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 ARNTLO00327 626 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 HOXC11O43248 304 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-208ENST00000634934 NARSO43776 548 aaKnown RBP14.82□□□□□ -0.04
LINC00339-208ENST00000634934 RNF40O75150 1001 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 FGGP02679 453 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 ZFXP17010 805 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-208ENST00000634934 MAPKAPK2P49137 400 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 LMAN1P49257 510 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 TDGQ13569 410 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 C6orf118Q5T5N4 469 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 NCBP2-AS2Q69YL0 99 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 SLC9A4Q6AI14 798 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 BBS12Q6ZW61 710 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 SLC13A5Q86YT5 568 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-208ENST00000634934 NETO2Q8NC67 525 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 HAUS1Q96CS2 278 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 CELF6Q96J87 481 aaKnown RBP14.82□□□□□ -0.04
LINC00339-208ENST00000634934 DONSONQ9NYP3 566 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 SMARCAL1Q9NZC9 954 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 EFR3BQ9Y2G0 817 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 HEY1Q9Y5J3 304 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 TCRBV7S2A1N4TA0A589 114 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 OPA1O60313 960 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 RHOCP08134 193 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 SERPINB6P35237 376 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 NPNTQ6UXI9 565 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 CCDC33Q8N5R6 958 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 NPWQ8N729 165 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 PLD5Q8N7P1 536 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 WFDC5Q8TCV5 224 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 XPO6Q96QU8 1125 aaKnown RBP14.81□□□□□ -0.04
LINC00339-208ENST00000634934 RETREG1Q9H6L5 497 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 PRDM16Q9HAZ2 1276 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 DNAJC17Q9NVM6 304 aaKnown RBP14.81□□□□□ -0.04
LINC00339-208ENST00000634934 SAE1Q9UBE0 346 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-208ENST00000634934 ZNF212Q9UDV6 495 aa14.81□□□□□ -0.04
LINC00339-208ENST00000634934 SRRM3A6NNA2 597 aaPredicted RBP14.8□□□□□ -0.04
LINC00339-208ENST00000634934 PGRMC1O00264 195 aaKnown RBP14.8□□□□□ -0.04
LINC00339-208ENST00000634934 MFSD11O43934 449 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 RAMP2O60895 175 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 MAP3K6O95382 1288 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 TGM2P21980 687 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 GJA4P35212 333 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 SOX9P48436 509 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 NUMBP49757 651 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 GBE1Q04446 702 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 PAFAH1B3Q15102 231 aaKnown RBP14.8□□□□□ -0.04
LINC00339-208ENST00000634934 FSCBQ5H9T9 825 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 RNF219Q5W0B1 726 aaPredicted RBP14.8□□□□□ -0.04
LINC00339-208ENST00000634934 SETD3Q86TU7 594 aaPredicted RBP14.8□□□□□ -0.04
LINC00339-208ENST00000634934 C12orf40Q86WS4 652 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 ZNF354CQ86Y25 554 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 RASGEF1CQ8N431 466 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 LZTR1Q8N653 840 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 FIBINQ8TAL6 211 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 MUC3BQ9H195 1237 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 GDF3Q9NR23 364 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 TBC1D30Q9Y2I9 924 aa14.8□□□□□ -0.04
LINC00339-208ENST00000634934 BHMG1C9JSJ3 638 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-208ENST00000634934 AGPSO00116 658 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 DFFAO00273 331 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 CACNG3O60359 315 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 SRFP11831 508 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 PECAM1P16284 738 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-208ENST00000634934 SLC6A11P48066 632 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 PFKPQ01813 784 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 POLD3Q15054 466 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-208ENST00000634934 RNF43Q68DV7 783 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 CXorf57Q6NSI4 855 aaKnown RBP14.79□□□□□ -0.04
LINC00339-208ENST00000634934 TP53INP2Q8IXH6 220 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 UMODL1-AS1Q8N2C9 162 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 ZNF557Q8N988 423 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-208ENST00000634934 OR52K2Q8NGK3 314 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 ACTRT1Q8TDG2 376 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 P3H4Q92791 437 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 NAP1L3Q99457 506 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-208ENST00000634934 FAM118BQ9BPY3 351 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 SPON2Q9BUD6 331 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 SLC2A11Q9BYW1 496 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 KLC2Q9H0B6 622 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 EPHX3Q9H6B9 360 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 ABCB8Q9NUT2 735 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 KIAA1522Q9P206 1035 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-208ENST00000634934 TTC7AQ9ULT0 858 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-208ENST00000634934 SORCS3Q9UPU3 1222 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 MYOFQ9NZM1 2061 aa14.79□□□□□ -0.04
LINC00339-208ENST00000634934 COL4A3Q01955 1670 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 ILVBLA1L0T0 632 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 GOLGA6BA6NDN3 693 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 RASA4BC9J798 803 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 APOC4-APOC2K7ER74 178 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 TRIM24O15164 1050 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 RASA4O43374 803 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 DCXO43602 365 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 TULP3O75386 442 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms