RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 IRAK2O43187 625 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 DFNA5O60443 496 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 RNASEH2AO75792 299 aaKnown RBP16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 IGHV4-34P06331 123 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 PBX1P40424 430 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 CSKP41240 450 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 RACK1P63244 317 aaKnown RBP16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 CST6Q15828 149 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 ASIC2Q16515 512 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 NAA35Q5VZE5 725 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 NADSYN1Q6IA69 706 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 OR6B2Q6IFH4 312 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 NCEH1Q6PIU2 408 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 MMS22LQ6ZRQ5 1243 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 ERICH1Q86X53 443 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 PDCD7Q8N8D1 485 aaKnown RBP16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 HJURPQ8NCD3 748 aaPredicted RBP16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 ZNF397Q8NF99 534 aaPredicted RBP16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 SKA1Q96BD8 255 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 DCBLD2Q96PD2 775 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 DDX50Q9BQ39 737 aaKnown RBP16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 ORAI3Q9BRQ5 295 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 TTYH3Q9C0H2 523 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 TJP2Q9UDY2 1190 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 SERGEFQ9UGK8 458 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 INTS6Q9UL03 887 aaKnown RBP16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 SCML1Q9UN30 329 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 ANKRD11Q6UB99 2663 aaPredicted RBP16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 ITIH6Q6UXX5 1313 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 A0A1W2PPC4 97 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 TTC34A8MYJ7 566 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 CBX4O00257 560 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 PLK4O00444 970 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 VILLO15195 856 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 MOCS2O96007 188 aaPredicted RBP16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 IGLV3-27P01718 113 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 ERBB2P04626 1255 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 ITGAVP06756 1048 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 ABCB4P21439 1286 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 SLC8A1P32418 973 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 NUMBP49757 651 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 NOMO3P69849 1222 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 FMO1Q01740 532 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 SFSWAPQ12872 951 aaKnown RBP16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 CAMK2BQ13554 666 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 CDH18Q13634 790 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 SMAD1Q15797 465 aaKnown RBP16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 HNRNPA1L2Q32P51 320 aaKnown RBP16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 INAVAQ3KP66 663 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 FSCBQ5H9T9 825 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 EFHC1Q5JVL4 640 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 SFMBT2Q5VUG0 894 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 FAM183BPQ6ZVS7 135 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 USP30Q70CQ3 517 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 ZDHHC17Q8IUH5 632 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 ZNF557Q8N988 423 aaPredicted RBP16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 ADAM32Q8TC27 787 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 TTC17Q96AE7 1141 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 MYEOVQ96EZ4 313 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 MYO19Q96H55 970 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 ANP32EQ9BTT0 268 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 NUCKS1Q9H1E3 243 aaKnown RBP16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 EBF2Q9HAK2 575 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 POPDC2Q9HBU9 364 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 DKK4Q9UBT3 224 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 ERVW-1Q9UQF0 538 aa16.04■□□□□ 0.16
SNRNP48-203ENST00000634363 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.04■□□□□ 0.161e-6■□□□□ 9.2
SNRNP48-203ENST00000634363 ACACAQ13085 2346 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 A0A1B0GTQ1 180 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 A0A1W2PQJ5 194 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 FAM170AA1A519 330 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 LRRC72A6NJI9 287 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 HSF2BPO75031 334 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 ASLP04424 464 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 WNT1P04628 370 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 GLI1P08151 1106 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 C7P10643 843 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 JUPP14923 745 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 CHRNB2P17787 502 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 CTSOP43234 321 aaPredicted RBP16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 CLDN6P56747 220 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 YWHAZP63104 245 aaKnown RBP16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 C9orf64Q5T6V5 341 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 BEND5Q7L4P6 421 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 OR14C36Q8NHC7 312 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 CPA5Q8WXQ8 436 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 AZIN2Q96A70 460 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 CRELD1Q96HD1 420 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 LMLNQ96KR4 655 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 RPL10LQ96L21 214 aaKnown RBP16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 MRGPRX3Q96LB0 322 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 PRICKLE1Q96MT3 831 aaPredicted RBP16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 ELF4Q99607 663 aaPredicted RBP16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 AGPAT1Q99943 283 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 IRX2Q9BZI1 471 aaPredicted RBP16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 SCUBE2Q9NQ36 999 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 ASNSD1Q9NWL6 643 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 SLCO3A1Q9UIG8 710 aa16.03■□□□□ 0.16
SNRNP48-203ENST00000634363 NAALADL1Q9UQQ1 740 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms