RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 FBXL14Q8N1E6 418 aa3.64□□□□□ -1.83
SRP54-214ENST00000630962 PTGR2Q8N8N7 351 aaPredicted RBP3.64□□□□□ -1.83
SRP54-214ENST00000630962 FSIP1Q8NA03 581 aa3.64□□□□□ -1.83
SRP54-214ENST00000630962 OR6Y1Q8NGX8 325 aa3.64□□□□□ -1.83
SRP54-214ENST00000630962 GABPB2Q8TAK5 448 aaPredicted RBP3.64□□□□□ -1.83
SRP54-214ENST00000630962 FRG2BQ96QU4 278 aa3.64□□□□□ -1.83
SRP54-214ENST00000630962 ISCUQ9H1K1 167 aa3.64□□□□□ -1.83
SRP54-214ENST00000630962 CATSPERBQ9H7T0 1116 aa3.64□□□□□ -1.83
SRP54-214ENST00000630962 SIRT3Q9NTG7 399 aaPredicted RBP3.64□□□□□ -1.83
SRP54-214ENST00000630962 PCDHA10Q9Y5I2 948 aa3.64□□□□□ -1.83
SRP54-214ENST00000630962 CCDC194A0A1B0GVG4 234 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 CXorf65A6NEN9 183 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 OR6C75A6NL08 312 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 A6NNC1 897 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 H0YGN5 161 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 TFRCP02786 760 aaKnown RBP3.63□□□□□ -1.83
SRP54-214ENST00000630962 CYP1A2P05177 515 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 MMP3P08254 477 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 ARSBP15848 533 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 HOXD3P31249 432 aaPredicted RBP3.63□□□□□ -1.83
SRP54-214ENST00000630962 ZP1P60852 638 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 RHAGQ02094 409 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 DCTN1Q14203 1278 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 DNTTIP2Q5QJE6 756 aaKnown RBP3.63□□□□□ -1.83
SRP54-214ENST00000630962 WASHC2DQ5SRD0 308 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 FAM171A1Q5VUB5 890 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 HMBOX1Q6NT76 420 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 RTL10Q7L3V2 364 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 PELI3Q8N2H9 469 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 ENAHQ8N8S7 591 aaPredicted RBP3.63□□□□□ -1.83
SRP54-214ENST00000630962 C7orf57Q8NEG2 295 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 C3orf49Q96BT1 292 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 TRAPPC9Q96Q05 1148 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 ZPBPQ9BS86 351 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 PAGR1Q9BTK6 254 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 DDX23Q9BUQ8 820 aaKnown RBP3.63□□□□□ -1.83
SRP54-214ENST00000630962 MECRQ9BV79 373 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 IFT27Q9BW83 186 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 TRIM31Q9BZY9 425 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 ARHGAP39Q9C0H5 1083 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.63□□□□□ -1.83
SRP54-214ENST00000630962 PABPC3Q9H361 631 aaKnown RBP3.63□□□□□ -1.83
SRP54-214ENST00000630962 SAYSD1Q9NPB0 183 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 ARL15Q9NXU5 204 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 LRFN1Q9P244 771 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 ZNF580Q9UK33 172 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 DAPP1Q9UN19 280 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 PCDHA7Q9UN72 937 aa3.63□□□□□ -1.83
SRP54-214ENST00000630962 A0A1W2PPC1 479 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 hCG_1642624A0A1W2PR95 340 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 F5H423 210 aaPredicted RBP3.62□□□□□ -1.83
SRP54-214ENST00000630962 TNFRSF13BO14836 293 aaPredicted RBP3.62□□□□□ -1.83
SRP54-214ENST00000630962 RNMTO43148 476 aaKnown RBP3.62□□□□□ -1.83
SRP54-214ENST00000630962 TNFRSF6BO95407 300 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 HOXB2P14652 356 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 CPA1P15085 419 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 PDIA3P30101 505 aaKnown RBP3.62□□□□□ -1.83
SRP54-214ENST00000630962 FAM3BP58499 235 aaPredicted RBP3.62□□□□□ -1.83
SRP54-214ENST00000630962 CDK18Q07002 472 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 GOLGA8FQ08AF8 430 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 GXYLT1Q4G148 440 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 CCDC38Q502W7 563 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 ENTPD8Q5MY95 495 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 TMEM268Q5VZI3 342 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 GGT6Q6P531 493 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 SLC30A9Q6PML9 568 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 SLC16A12Q6ZSM3 486 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 GALNT7Q86SF2 657 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 CCDC25Q86WR0 208 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 ATG16L2Q8NAA4 619 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 B4GALNT2Q8NHY0 566 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 OTUD7AQ8TE49 926 aaPredicted RBP3.62□□□□□ -1.83
SRP54-214ENST00000630962 KAT2AQ92830 837 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 ZNF419Q96HQ0 510 aaPredicted RBP3.62□□□□□ -1.83
SRP54-214ENST00000630962 CRB3Q9BUF7 120 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 CADM1Q9BY67 442 aaKnown RBP3.62□□□□□ -1.83
SRP54-214ENST00000630962 MAP6D1Q9H9H5 199 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 SEPSECSQ9HD40 501 aaKnown RBP3.62□□□□□ -1.83
SRP54-214ENST00000630962 NCKIPSDQ9NZQ3 722 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 IL36RNQ9UBH0 155 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 FBXO40Q9UH90 709 aa3.62□□□□□ -1.83
SRP54-214ENST00000630962 TRBV5-7A0A0A0MS05 114 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 AGAP5A6NIR3 686 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 MS4A18H0YCH9 400 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 GRM8O00222 908 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 VWA5AO00534 786 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 ACKR2O00590 384 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 ACOT8O14734 319 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 SPRY3O43610 288 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 TMCC1O94876 653 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 CYP4B1P13584 511 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 ENO3P13929 434 aaPredicted RBP3.61□□□□□ -1.83
SRP54-214ENST00000630962 PRPH2P23942 346 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 PRKCHP24723 683 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 CST5P28325 142 aaPredicted RBP3.61□□□□□ -1.83
SRP54-214ENST00000630962 SKIV2L2P42285 1042 aaKnown RBP3.61□□□□□ -1.83
SRP54-214ENST00000630962 NANOS2P60321 138 aaKnown RBP3.61□□□□□ -1.83
SRP54-214ENST00000630962 ZXDBP98169 803 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 KLHL22Q53GT1 634 aa3.61□□□□□ -1.83
SRP54-214ENST00000630962 MEPCEQ7L2J0 689 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms