RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CEBPBP17676 345 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 ALDH3A1P30838 453 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 MPP2Q14168 576 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 HIBCHQ6NVY1 386 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 CIR1Q86X95 450 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 GPR65Q8IYL9 337 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 CNPY4Q8N129 248 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 CPA6Q8N4T0 437 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 ITFG1Q8TB96 612 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 FNIP1Q8TF40 1166 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 FGF13Q92913 245 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 PLD4Q96BZ4 506 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 DEC1Q9P2X7 70 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 LIMD1Q9UGP4 676 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 SLC25A13Q9UJS0 675 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 LEFTY2O00292 366 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 ACSL3O95573 720 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 HHATQ5VTY9 493 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 ANKRD54Q6NXT1 300 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 CYP4X1Q8N118 509 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 PYROXD2Q8N2H3 581 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 EFHBQ8N7U6 833 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 CDX2Q99626 313 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 TXNDC16Q9P2K2 825 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 CTNNAL1Q9UBT7 734 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 IRAK3Q9Y616 596 aa12.75□□□□□ -0.37
SYNGAP1-207ENST00000628646 CFAP69A5D8W1 941 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 TTC4O95801 387 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 OAS1P00973 400 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 KDELR1P24390 212 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 KDSRQ06136 332 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 GPS1Q13098 491 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 RETSATQ6NUM9 610 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 OVCA2Q8WZ82 227 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 SMARCD2Q92925 531 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 ZFYVE19Q96K21 471 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 EBF3Q9H4W6 596 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 CSNK1G1Q9HCP0 422 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 TLR6Q9Y2C9 796 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 ERCC2P18074 760 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 POLR2EP19388 210 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 PTPN7P35236 360 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 LONRF1Q17RB8 773 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 SYCP2LQ5T4T6 812 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 DRICH1Q6PGQ1 229 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 ATP11CQ8NB49 1132 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 PYROXD1Q8WU10 500 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 CCT6BQ92526 530 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 FSD1LQ9BXM9 530 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 SMOC2Q9H3U7 446 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 UBE2ZQ9H832 354 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 SAYSD1Q9NPB0 183 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 NINJ2Q9NZG7 142 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 NDRG2Q9UN36 371 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 EXOC1LA0A1B0GW35 172 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 SLCO1A2P46721 670 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 ARSEP51690 589 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 RPS24P62847 133 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 HYAL1Q12794 435 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 LRIT3Q3SXY7 679 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 MPPE1Q53F39 396 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 NIPA2Q8N8Q9 360 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 TMPRSS4Q9NRS4 437 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 A0A1W2PPC1 479 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 LIASO43766 372 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 SCNN1AP37088 669 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 OTUD4Q01804 1114 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 OASLQ15646 514 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 PTCRAQ6ISU1 281 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 MTSS1LQ765P7 747 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 SCD5Q86SK9 330 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 SHKBP1Q8TBC3 707 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 IFT43Q96FT9 208 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 CHMP6Q96FZ7 201 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 CINPQ9BW66 212 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 MAD1L1Q9Y6D9 718 aa12.74□□□□□ -0.37
SYNGAP1-207ENST00000628646 HEPACAM2A8MVW5 462 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 C5orf67F2Z3F1 127 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 ATP5BP06576 529 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 TFE3P19532 575 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 IL9RQ01113 521 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 ACTN3Q08043 901 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 TAZQ16635 292 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 LACTB2Q53H82 288 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 RFX8Q6ZV50 586 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 ACTL9Q8TC94 416 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 SREK1Q8WXA9 508 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 FAF2Q96CS3 445 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 SMC6Q96SB8 1091 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 TMEM30AQ9NV96 361 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 CDH22Q9UJ99 828 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 CDH7Q9ULB5 785 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 TPX2Q9ULW0 747 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 CLUHO75153 1309 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 SYNCRIPO60506 623 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 LRIG2O94898 1065 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 C1RP00736 705 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 GABRB2P47870 512 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 IFT88Q13099 833 aa12.73□□□□□ -0.37
SYNGAP1-207ENST00000628646 ZRSR2Q15696 482 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms