RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 RGS14O43566 566 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 SH3BGRLO75368 114 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 EIF2S1P05198 315 aaKnown RBP13.02□□□□□ -0.33
SCN8A-209ENST00000627620 HOXB8P17481 243 aaPredicted RBP13.02□□□□□ -0.33
SCN8A-209ENST00000627620 PSMB4P28070 264 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 NOS3P29474 1203 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 GTF2BQ00403 316 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 ZC3H12AQ5D1E8 599 aaKnown RBP13.02□□□□□ -0.33
SCN8A-209ENST00000627620 WASHC2DQ5SRD0 308 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 NEPROQ6NW34 567 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 KYAT3Q6YP21 454 aaKnown RBP13.02□□□□□ -0.33
SCN8A-209ENST00000627620 USP45Q70EL2 814 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 PALB2Q86YC2 1186 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 LRRN4CLQ8ND94 238 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 SNRNP27Q8WVK2 155 aaKnown RBP13.02□□□□□ -0.33
SCN8A-209ENST00000627620 ASB2Q96Q27 587 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 TMEM237Q96Q45 408 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 IGFLR1Q9H665 355 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 ACP6Q9NPH0 428 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 ARL15Q9NXU5 204 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 FAM50BQ9Y247 325 aa13.02□□□□□ -0.33
SCN8A-209ENST00000627620 PEX1O43933 1283 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 TRUB2O95900 331 aaKnown RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 FAM58BPP0C7Q3 252 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 ALADP13716 330 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 NPR3P17342 541 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 PSMB9P28065 219 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 FEN1P39748 380 aaKnown RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 CLK2P49760 499 aaKnown RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 DDR2Q16832 855 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 ZNF544Q6NX49 715 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 IL27RAQ6UWB1 636 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 FAM183BPQ6ZVS7 135 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 TMEM132CQ8N3T6 1108 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 RNF145Q96MT1 663 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 RNF208Q9H0X6 261 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 NCKAP1Q9Y2A7 1128 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 TPP1O14773 563 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 DCXO43602 365 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 KRT75O95678 551 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 ATP5BP06576 529 aaKnown RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 HOXA10P31260 410 aaPredicted RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 PIK3CGP48736 1102 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 IKBKEQ14164 716 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 FBXL19Q6PCT2 694 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 CXCL17Q6UXB2 119 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 CASP12Q6UXS9 341 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 STK40Q8N2I9 435 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 GDPD5Q8WTR4 605 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 ADPRHL2Q9NX46 363 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 LDLRP01130 860 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 IL2P60568 153 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 PABPC1LQ4VXU2 614 aaKnown RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 PCID2Q5JVF3 399 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 CYP2R1Q6VVX0 501 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 VGLL2Q8N8G2 317 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 OR52K1Q8NGK4 314 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 PPP1R13LQ8WUF5 828 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 HAS1Q92839 578 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 PGM2Q96G03 612 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 IL22Q9GZX6 179 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 HES2Q9Y543 173 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 A0A0A0MRY4 1105 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 CNPP09543 421 aaKnown RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 DGKAP23743 735 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 ZNF143P52747 638 aaPredicted RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 MSLNQ13421 630 aaPredicted RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 ARMCX4Q5H9R4 360 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 C16orf46Q6P387 395 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 CSGALNACT1Q8TDX6 532 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 SPATA13Q96N96 652 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 SEMA4BQ9NPR2 832 aaPredicted RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 TK2O00142 265 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 CHADO15335 359 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 PRKCIP41743 596 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 ABCG1P45844 678 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 KRR1Q13601 381 aaKnown RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 TRIM71Q2Q1W2 868 aaKnown RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 RAP1GAP2Q684P5 730 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 RINLQ6ZS11 566 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 MTFMTQ96DP5 389 aaKnown RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 CDRT15Q96T59 188 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 FAM126AQ9BYI3 521 aaPredicted RBP13.01□□□□□ -0.33
SCN8A-209ENST00000627620 MYLK2Q9H1R3 596 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 NDOR1Q9UHB4 597 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 PCDHGC5Q9Y5F6 944 aa13.01□□□□□ -0.33
SCN8A-209ENST00000627620 MEIS2O14770 477 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 PIGNO95427 931 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 SMIM10L2AP0DMW4 78 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 SMIM10L2BP0DMW5 78 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 ME2P23368 584 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 CDK16Q00536 496 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 CYP2A13Q16696 494 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 HLA-DQA1Q5Y7H0 255 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 ZNF621Q6ZSS3 439 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 TRAPPC5Q8IUR0 188 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 SYT12Q8IV01 421 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 SUSD6Q92537 303 aa13□□□□□ -0.33
SCN8A-209ENST00000627620 NMD3Q96D46 503 aaKnown RBP13□□□□□ -0.33
SCN8A-209ENST00000627620 SLC25A23Q9BV35 468 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms