RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 SORCS1Q8WY21 1168 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 MRGPRX1Q96LB2 322 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 ZWILCHQ9H900 591 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 CD248Q9HCU0 757 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 CTTNBP2NLQ9P2B4 639 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 USP18Q9UMW8 372 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 AP4E1Q9UPM8 1137 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 HS3ST2Q9Y278 367 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 FARP1Q9Y4F1 1045 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 PCDHGA5Q9Y5G8 931 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 OR51B4Q9Y5P0 310 aa14.37□□□□□ -0.11
SNRPA1-216ENST00000626000 SPAG17Q6Q759 2223 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 WASH4PA8MWX3 477 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 ALOX15BO15296 676 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 MAP3K13O43283 966 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 HRO43593 1189 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 RAMP2O60895 175 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 LRCH4O75427 683 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 CNTN5O94779 1100 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 RETP07949 1114 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 NDUFV2P19404 249 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 MIPP30301 263 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 MAN1A1P33908 653 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 ARL4AP40617 200 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 ARHGAP25P42331 645 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 HCAR3P49019 387 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 PXNP49023 591 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 TPI1P60174 286 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 GNA12Q03113 381 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 PARP15Q460N3 678 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 ZNF776Q68DI1 518 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 LPCAT2Q7L5N7 544 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 TMPRSS6Q8IU80 811 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 TMTC1Q8IUR5 882 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 CASKIN2Q8WXE0 1202 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 RFFLQ8WZ73 363 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 ALG14Q96F25 216 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 SIPA1Q96FS4 1042 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 PCED1AQ9H1Q7 454 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 ZDHHC4Q9NPG8 344 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 MPP6Q9NZW5 540 aa14.36□□□□□ -0.11
SNRPA1-216ENST00000626000 H3BRJ5 948 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 DAPK3O43293 454 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 AP5Z1O43299 807 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 ATP9BO43861 1147 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 CREB3O43889 395 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 IGLV3-19P01714 112 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 DNTTP04053 509 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 KRT7P08729 469 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 ATXN8OSP0DMR3 200 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 MZF1P28698 734 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 ZNF252P-AS1Q0IIN9 211 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 CCDC15Q0P6D6 951 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 SEMA3BQ13214 749 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 TCEAL1Q15170 157 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 KIAA1211LQ6NV74 962 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 KIAA1324Q6UXG2 1013 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 KBTBD6Q86V97 674 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 NLRP14Q86W24 1093 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 APCDD1Q8J025 514 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 LZTR1Q8N653 840 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 MRGPRX3Q96LB0 322 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 CHP1Q99653 195 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 SNRNP25Q9BV90 132 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 TPSD1Q9BZJ3 242 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 CEP44Q9C0F1 390 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 RSPH9Q9H1X1 276 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 DHX35Q9H5Z1 703 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 ATP13A1Q9HD20 1204 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 TMPRSS4Q9NRS4 437 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 RCOR3Q9P2K3 495 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 ZNF212Q9UDV6 495 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 TPX2Q9ULW0 747 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 RAD54BQ9Y620 910 aa14.35□□□□□ -0.11
SNRPA1-216ENST00000626000 WASH3PC4AMC7 463 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 EEF2KO00418 725 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 NDUFS2O75306 463 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 MTA2O94776 668 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 PROSCO94903 275 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 LCA5LO95447 670 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 FECHP22830 423 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 HOXD12P35452 270 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 RECQLP46063 649 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 IRAK1P51617 712 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 NDST2P52849 883 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 GSDMDP57764 484 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 POLD3Q15054 466 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 DPYSL2Q16555 572 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 MAP7D1Q3KQU3 841 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 PLK5Q496M5 336 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 FAM46CQ5VWP2 391 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 IL31Q6EBC2 164 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 USP30Q70CQ3 517 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 RABEPKQ7Z6M1 372 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 ALYREFQ86V81 257 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 MAP7D3Q8IWC1 876 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 UMODL1-AS1Q8N2C9 162 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 SH2D3CQ8N5H7 860 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 FOXJ1Q92949 421 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 MYO19Q96H55 970 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms