RNA–Protein interactions for RNA: ENST00000621069.1

KRBA1-209, Transcript of KRAB-A domain containing 1, humanhuman

TSL 1 (best)

Gene KRBA1, Length 3,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBA1-209ENST00000621069 ATPAF2Q8N5M1 289 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 PDCD7Q8N8D1 485 aaKnown RBP12.85□□□□□ -0.35
KRBA1-209ENST00000621069 IPMKQ8NFU5 416 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 CMASQ8NFW8 434 aaPredicted RBP12.85□□□□□ -0.35
KRBA1-209ENST00000621069 SPATA22Q8NHS9 363 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 FNIP1Q8TF40 1166 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 NT5MQ9NPB1 228 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 INTS9Q9NV88 658 aaKnown RBP12.85□□□□□ -0.35
KRBA1-209ENST00000621069 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.85□□□□□ -0.35
KRBA1-209ENST00000621069 NFS1Q9Y697 457 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 NEDD8-MDP1E9PL57 170 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 ANKRD22Q5VYY1 191 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 TMC3Q7Z5M5 1100 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 BBS7Q8IWZ6 715 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 CTAGE3PQ8IX95 158 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 CIPCQ9C0C6 399 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 YIPF3Q9GZM5 350 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 KCNK9Q9NPC2 374 aa12.85□□□□□ -0.35
KRBA1-209ENST00000621069 CCT8L1PA6NM43 557 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 J3KR12 359 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 RGS16O15492 202 aaPredicted RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 HADHBP55084 474 aaKnown RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 MCCD1P59942 119 aaPredicted RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 SEPT6Q14141 434 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 GRM2Q14416 872 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 LRRC73Q5JTD7 316 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 ARID3BQ8IVW6 561 aaPredicted RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 ATP6V0D2Q8N8Y2 350 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 EPS8L3Q8TE67 593 aaKnown RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 SH3RF2Q8TEC5 729 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 SLC46A2Q9BY10 475 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 DNMT3BQ9UBC3 853 aaKnown RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 RNF14Q9UBS8 474 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 CHMP2BQ9UQN3 213 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 USP3Q9Y6I4 520 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 TBC1D4O60343 1298 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 MT-CYBP00156 380 aaPredicted RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 SLC11A2P49281 568 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 HTRA4P83105 476 aaPredicted RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 PDIA2Q13087 525 aaKnown RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 BIRC2Q13490 618 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 FASTKD3Q14CZ7 662 aaKnown RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 TCEAL5Q5H9L2 206 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 MS4A13Q5J8X5 152 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 PM20D1Q6GTS8 502 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 MREGQ8N565 214 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 AGAP11Q8TF27 550 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 CCT6BQ92526 530 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 TMA16Q96EY4 203 aaKnown RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 PAIP2Q9BPZ3 127 aaKnown RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 RC3H2Q9HBD1 1191 aaKnown RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 VPS28Q9UK41 221 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 RNF103O00237 685 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 SNAP91O60641 907 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 SLC8A1P32418 973 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 RPL22P35268 128 aaKnown RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 WASP42768 502 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 ABCG1P45844 678 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 ZXDBP98169 803 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 DLX2Q07687 328 aaPredicted RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 TNK2Q07912 1038 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 CUL1Q13616 776 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 NOMO1Q15155 1222 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 NCBP2-AS2Q69YL0 99 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 CCDC149Q6ZUS6 474 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 ITIH5Q86UX2 942 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 CCDC117Q8IWD4 279 aaPredicted RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 RASGEF1CQ8N431 466 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 TFB1MQ8WVM0 346 aaKnown RBP12.84□□□□□ -0.35
KRBA1-209ENST00000621069 SORCS1Q8WY21 1168 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 PSMG2Q969U7 264 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 SLC2A13Q96QE2 648 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 BACE2Q9Y5Z0 518 aa12.84□□□□□ -0.35
KRBA1-209ENST00000621069 APOC4-APOC2K7ER74 178 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 UBOX5O94941 541 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 APOC2P02655 101 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 PSMB4P28070 264 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 SLC29A2Q14542 456 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 HOOK3Q86VS8 718 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 RUBCNQ92622 972 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 FAM136AQ96C01 138 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 P2RY11Q96G91 374 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 SEMA4AQ9H3S1 761 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 ZNF576Q9H609 170 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 MTRF1LQ9UGC7 380 aaKnown RBP12.83□□□□□ -0.36
KRBA1-209ENST00000621069 ANTXRLA6NF34 631 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 PRAMEF12O95522 483 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 SLC6A4P31645 630 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 GKP32189 559 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 PDK2Q15119 407 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 SIX1Q15475 284 aaPredicted RBP12.83□□□□□ -0.36
KRBA1-209ENST00000621069 WLSQ5T9L3 541 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 BBS12Q6ZW61 710 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 HERC2P3Q9BVR0 1158 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 SLC39A8Q9C0K1 460 aa12.83□□□□□ -0.36
KRBA1-209ENST00000621069 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.83□□□□□ -0.36
KRBA1-209ENST00000621069 RBM22Q9NW64 420 aaKnown RBP eCLIP12.83□□□□□ -0.36
KRBA1-209ENST00000621069 CCDC189A1A4V9 331 aa12.82□□□□□ -0.36
KRBA1-209ENST00000621069 EME2A4GXA9 379 aaPredicted RBP12.82□□□□□ -0.36
KRBA1-209ENST00000621069 CCL22O00626 93 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms