RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 ZNF483Q8TF39 744 aaPredicted RBP10.15□□□□□ -0.78
VTA1-205ENST00000620996 IGSF21Q96ID5 467 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 PPCSQ9HAB8 311 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 BFARQ9NZS9 450 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 SENP1Q9P0U3 644 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 PCDHA11Q9Y5I1 949 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 TRDMT1O14717 391 aaKnown RBP10.15□□□□□ -0.78
VTA1-205ENST00000620996 MTSS1O43312 755 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 KRT37O76014 449 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 CNTN5O94779 1100 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 CXCL10P02778 98 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 SPATA31D3P0C874 917 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 CSH1P0DML2 217 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 CSH2P0DML3 217 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 CDC25CP30307 473 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 ETFBP38117 255 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 PAPOLAP51003 745 aaKnown RBP10.15□□□□□ -0.78
VTA1-205ENST00000620996 SPATA31D4Q6ZUB0 917 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 CFAP52Q8N1V2 620 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 SLC44A1Q8WWI5 657 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 LRRC39Q96DD0 335 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 ZNF558Q96NG5 402 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 YME1L1Q96TA2 773 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 GBA3Q9H227 469 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 ATXN3LQ9H3M9 355 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 SMYD2Q9NRG4 433 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.15□□□□□ -0.78
VTA1-205ENST00000620996 RBM22Q9NW64 420 aaKnown RBP eCLIP10.15□□□□□ -0.78
VTA1-205ENST00000620996 EURLQ9NYK6 297 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 SMG5Q9UPR3 1016 aaKnown RBP10.15□□□□□ -0.78
VTA1-205ENST00000620996 RAD54BQ9Y620 910 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 LAMA2P24043 3122 aaKnown RBP10.15□□□□□ -0.78
VTA1-205ENST00000620996 NUP205Q92621 2012 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 E2F8A0AVK6 867 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 EIF4E1BA6NMX2 242 aaKnown RBP10.15□□□□□ -0.79
VTA1-205ENST00000620996 VNN2O95498 520 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 MT-CYBP00156 380 aaPredicted RBP10.15□□□□□ -0.79
VTA1-205ENST00000620996 ATF6P18850 670 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 MAGEA6P43360 314 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 KCNQ1P51787 676 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 DNAJC3Q13217 504 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 SLC1A5Q15758 541 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 MS4A13Q5J8X5 152 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 CERCAMQ5T4B2 595 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 LGSNQ5TDP6 509 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 SPOCK2Q92563 424 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 CDKL2Q92772 493 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 TTC17Q96AE7 1141 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 SP110Q9HB58 689 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 IGSF9Q9P2J2 1179 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 GGT7Q9UJ14 662 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 ACTL7BQ9Y614 415 aa10.15□□□□□ -0.79
VTA1-205ENST00000620996 MYO16Q9Y6X6 1858 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 PYGLP06737 847 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 ERVK-10P10266 1014 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 TSHRP16473 764 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 CD68P34810 354 aaPredicted RBP10.14□□□□□ -0.79
VTA1-205ENST00000620996 ALDH1A3P47895 512 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 MLLT6P55198 1093 aaPredicted RBP10.14□□□□□ -0.79
VTA1-205ENST00000620996 IRX4P78413 519 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 USP4Q13107 963 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 LRRC26Q2I0M4 334 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 ALFQ53S48 1182 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 TTC39BQ5VTQ0 682 aaPredicted RBP10.14□□□□□ -0.79
VTA1-205ENST00000620996 BEND5Q7L4P6 421 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 ANKS4BQ8N8V4 417 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 CCDC197Q8NCU1 140 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 TCP10LQ8TDR4 215 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 LRRC8CQ8TDW0 803 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 SERAC1Q96JX3 654 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 KLHL5Q96PQ7 755 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 FSD1LQ9BXM9 530 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 ZYG11BQ9C0D3 744 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 BRD8Q9H0E9 1235 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 TMEM165Q9HC07 324 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 TRPC7Q9HCX4 862 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 OLA1Q9NTK5 396 aaKnown RBP10.14□□□□□ -0.79
VTA1-205ENST00000620996 PCMTD2Q9NV79 361 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 ZFATQ9P243 1243 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 TRHDEQ9UKU6 1024 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 GOLGA8TH3BQL2 631 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 PARNO95453 639 aaKnown RBP10.14□□□□□ -0.79
VTA1-205ENST00000620996 AP2A1O95782 977 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 URODP06132 367 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 POLBP06746 335 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 PGAM1P18669 254 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 ADRA1DP25100 572 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 WDR4P57081 412 aaKnown RBP10.14□□□□□ -0.79
VTA1-205ENST00000620996 MAXP61244 160 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 CDK16Q00536 496 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 SEPT6Q14141 434 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 RFWD3Q6PCD5 774 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 RTL3Q8N8U3 475 aaKnown RBP10.14□□□□□ -0.79
VTA1-205ENST00000620996 CCDC63Q8NA47 563 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 CKAP2Q8WWK9 683 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 TEKT5Q96M29 485 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 MLPHQ9BV36 600 aaPredicted RBP10.14□□□□□ -0.79
VTA1-205ENST00000620996 FICDQ9BVA6 458 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 C11orf49Q9H6J7 331 aa10.14□□□□□ -0.79
VTA1-205ENST00000620996 NT5MQ9NPB1 228 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms