RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 UQCRC1P31930 480 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 CDK9P50750 372 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 TWF2Q6IBS0 349 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 IRF2BP1Q8IU81 584 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 TAS1R2Q8TE23 839 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 AMNQ9BXJ7 453 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 MID1IP1Q9NPA3 183 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PCYOX1Q9UHG3 505 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 SLC7A8Q9UHI5 535 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 SRRM3A6NNA2 597 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PIGNO95427 931 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 SERPINA6P08185 405 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ZBED5Q49AG3 693 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 AASDHQ4L235 1098 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 KRT74Q7RTS7 529 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PHTF2Q8N3S3 785 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ACTL9Q8TC94 416 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 KBTBD7Q8WVZ9 684 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 KLHL1Q9NR64 748 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 MID2Q9UJV3 735 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 SOCS7O14512 581 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 RARBP10826 455 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 EIF3MQ7L2H7 374 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 CCDC28AQ8IWP9 274 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ST8SIA2Q92186 375 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 PIK3R3Q92569 461 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF669Q96BR6 464 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 VMP1Q96GC9 406 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 KIAA1522Q9P206 1035 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 RGSL1A5PLK6 1076 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ITGAXP20702 1163 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 SPRP35270 261 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 EVX2Q03828 476 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 FBXO48Q5FWF7 155 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 GARNL3Q5VVW2 1013 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 STYK1Q6J9G0 422 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 CHMP1BQ7LBR1 199 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 COMMD7Q86VX2 200 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 LRRC17Q8N6Y2 441 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ACOX2Q99424 681 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 RSAD1Q9HA92 442 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 NCAM1P13591 858 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 EVI2BP34910 448 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 GRIA4P48058 902 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 SNRNP35Q16560 246 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 SAMD3Q8N6K7 520 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 TFB1MQ8WVM0 346 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 C12orf43Q96C57 262 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 F8VP50 259 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 FCER2P06734 321 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ALOX5P09917 674 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 GTF2E2P29084 291 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 FNTBP49356 437 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 POU4F3Q15319 338 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ECM1Q16610 540 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 DENND5AQ6IQ26 1287 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 CAMK1DQ8IU85 385 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 ZDHHC13Q8IUH4 622 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 OR6B3Q8NGW1 331 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 LENG8Q96PV6 779 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 MRPL45Q9BRJ2 306 aaKnown RBP5.12□□□□□ -1.59
VPS13D-214ENST00000620676 TOPBP1Q92547 1522 aa5.12□□□□□ -1.59
VPS13D-214ENST00000620676 A0A0G2JPF8 293 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 HNRNPCL3B7ZW38 293 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 HNRNPCL4P0DMR1 293 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 WDR4P57081 412 aaKnown RBP5.11□□□□□ -1.59
VPS13D-214ENST00000620676 MXD1Q05195 221 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 TBRG1Q3YBR2 411 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 TYW3Q6IPR3 259 aaKnown RBP5.11□□□□□ -1.59
VPS13D-214ENST00000620676 CDKL3Q8IVW4 592 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-214ENST00000620676 S100ZQ8WXG8 99 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 RIT1Q92963 219 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 BORCS6Q96GS4 357 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 TCF12Q99081 682 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 PPM1BO75688 479 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 CHRNB1P11230 501 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 TTKP33981 857 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 GTF2A2P52657 109 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 CDH13P55290 713 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 CRTC1Q6UUV9 634 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 KCNT2Q6UVM3 1135 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 GPD1LQ8N335 351 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 A0A0A6YYK5 440 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-214ENST00000620676 ITM2AO43736 263 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 UGT2B4P06133 528 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 PTGIRP43119 386 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 IDH3AP50213 366 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 FAPQ12884 760 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 MZT2BQ6NZ67 158 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 RPF1Q9H9Y2 349 aaKnown RBP5.11□□□□□ -1.59
VPS13D-214ENST00000620676 PPP2R3BQ9Y5P8 575 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 ADGRL3Q9HAR2 1447 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 PNPLA6Q8IY17 1366 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 LRRC14BA6NHZ5 514 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 PGRP06401 933 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 KLRK1P26718 216 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 BDH2Q9BUT1 245 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 CCDC177Q9NQR7 707 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-214ENST00000620676 GRHL1Q9NZI5 618 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 NUP50Q9UKX7 468 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms