RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RAB6CQ9H0N0 254 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 TMEM63CQ9P1W3 806 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 VPS28Q9UK41 221 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 SCML1Q9UN30 329 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 TBC1D30Q9Y2I9 924 aa17.65■□□□□ 0.42
HMGN3-203ENST00000620514 NYNRINQ9P2P1 1898 aaKnown RBP17.65■□□□□ 0.42
HMGN3-203ENST00000620514 PCNX2A6NKB5 2137 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 SH3BP5O60239 455 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 GJB6O95452 261 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 IGHV4-34P06331 123 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 SPINK2P20155 84 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 CDK11BP21127 795 aaKnown RBP17.64■□□□□ 0.41
HMGN3-203ENST00000620514 MMP8P22894 467 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 NNMTP40261 264 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 METAP1P53582 386 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 GALCP54803 685 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 UBXN1Q04323 297 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 KIAA0895LQ68EN5 471 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 NCEH1Q6PIU2 408 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 APTXQ7Z2E3 356 aaKnown RBP17.64■□□□□ 0.41
HMGN3-203ENST00000620514 FAM131BQ86XD5 332 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 AOPEPQ8N6M6 819 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 ANKRD20A12PQ8NF67 263 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 PSMB7Q99436 277 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 C11orf70Q9BRQ4 267 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 TM9SF3Q9HD45 589 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 MPP6Q9NZW5 540 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 WASF3Q9UPY6 502 aa17.64■□□□□ 0.41
HMGN3-203ENST00000620514 CHD8Q9HCK8 2581 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 DRGXA6NNA5 263 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 PLK4O00444 970 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 ATP9BO43861 1147 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 SNAP91O60641 907 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 IL1BP01584 269 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 RHOCP08134 193 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 ATP1A3P13637 1013 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 CD27P26842 260 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 RDXP35241 583 aaKnown RBP17.63■□□□□ 0.41
HMGN3-203ENST00000620514 SIM1P81133 766 aaPredicted RBP17.63■□□□□ 0.41
HMGN3-203ENST00000620514 ATP11AP98196 1134 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 TYRO3Q06418 890 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 ELAVL3Q14576 367 aaKnown RBP17.63■□□□□ 0.41
HMGN3-203ENST00000620514 HLA-BQ31612 363 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 ACCSLQ4AC99 568 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 TFAP2DQ7Z6R9 452 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 NEK11Q8NG66 645 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 JOSD2Q8TAC2 188 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 C1orf74Q96LT6 269 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 OMDQ99983 421 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 MUC3BQ9H195 1237 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 GAREM1Q9H706 876 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 ADAMTS1Q9UHI8 967 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 SLC25A13Q9UJS0 675 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 FNDC3AQ9Y2H6 1198 aaKnown RBP17.63■□□□□ 0.41
HMGN3-203ENST00000620514 DAAM1Q9Y4D1 1078 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 PAXBP1Q9Y5B6 917 aa17.63■□□□□ 0.41
HMGN3-203ENST00000620514 LRRC10BA6NIK2 292 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 E9PAM4 449 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 ADH1BP00325 375 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 MT-CO1P00395 513 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 UNGP13051 313 aaPredicted RBP17.62■□□□□ 0.41
HMGN3-203ENST00000620514 C5AR1P21730 350 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 DRD3P35462 400 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 VASPP50552 380 aaPredicted RBP17.62■□□□□ 0.41
HMGN3-203ENST00000620514 AFF3P51826 1226 aaKnown RBP17.62■□□□□ 0.41
HMGN3-203ENST00000620514 SFSWAPQ12872 951 aaKnown RBP17.62■□□□□ 0.41
HMGN3-203ENST00000620514 PTP4A2Q12974 167 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 SLC14A1Q13336 389 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 DLG2Q15700 870 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 C15orf59Q2T9L4 293 aaPredicted RBP17.62■□□□□ 0.41
HMGN3-203ENST00000620514 KIF19Q2TAC6 998 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 LRRC31Q6UY01 552 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 Q6ZVU0 165 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 ARCQ7LC44 396 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 RXFP2Q8WXD0 754 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 ERGIC2Q96RQ1 377 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 PPP1R9BQ96SB3 815 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 EBF2Q9HAK2 575 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 SARDHQ9UL12 918 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 FZD4Q9ULV1 537 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 SNX11Q9Y5W9 270 aa17.62■□□□□ 0.41
HMGN3-203ENST00000620514 IGLV3-10A0A075B6K4 115 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 A0A0D9SEW6 157 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 SRGAP2O75044 1071 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 ENDOD1O94919 500 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 GOT1P17174 413 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 CDO1Q16878 200 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 CCDC14Q49A88 953 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 ANO6Q4KMQ2 910 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 KCNT1Q5JUK3 1230 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 TRIM72Q6ZMU5 477 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 NAXDQ8IW45 347 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 SH2D3CQ8N5H7 860 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 OR2T34Q8NGX1 318 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 OR14C36Q8NHC7 312 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 HAPLN3Q96S86 360 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 OSGEPQ9NPF4 335 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 VPS51Q9UID3 782 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 ANKRD6Q9Y2G4 727 aa17.61■□□□□ 0.41
HMGN3-203ENST00000620514 A0A1W2PPC4 97 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms