RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 PAQR9Q6ZVX9 377 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 DHDDSQ86SQ9 333 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 SHCBP1Q8NEM2 672 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 DNAJB3Q8WWF6 145 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 WNT8BQ93098 351 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 IFT43Q96FT9 208 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 ZNF560Q96MR9 790 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 NR1H4Q96RI1 486 aaPredicted RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 HNRNPABQ99729 332 aaKnown RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 CDH19Q9H159 772 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 STAP1Q9ULZ2 295 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 G3BP2Q9UN86 482 aaKnown RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 POMPQ9Y244 141 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 PCDHB12Q9Y5F1 795 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 SNX10Q9Y5X0 201 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 RBM47A0AV96 593 aaKnown RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 AP2A1O95782 977 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 FYNP06241 537 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 C2P06681 752 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 FESP07332 822 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 CHRNGP07510 517 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 DARSP14868 501 aaKnown RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 ALOX15P16050 662 aaPredicted RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 PTPN1P18031 435 aaKnown RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 SERPINB5P36952 375 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 CCR10P46092 362 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 TKTL1P51854 596 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 POLE2P56282 527 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 TBL3Q12788 808 aaKnown RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 GSTA3Q16772 222 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 WSCD1Q658N2 575 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 PGM2L1Q6PCE3 622 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 SLC30A9Q6PML9 568 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 EPGNQ6UW88 154 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 DPP9Q86TI2 863 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 TMEM135Q86UB9 458 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 NPWQ8N729 165 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 OR6Y1Q8NGX8 325 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 URGCPQ8TCY9 931 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 OR52B2Q96RD2 323 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 FAM96AQ9H5X1 160 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 WDR55Q9H6Y2 383 aaPredicted RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 IARS2Q9NSE4 1012 aaKnown RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 C20orf96Q9NUD7 363 aaPredicted RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 CDY2AQ9Y6F7 541 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 CDY1Q9Y6F8 540 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 YJEFN3A6XGL0 299 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 NEMP1O14524 444 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 RNASEH1O60930 286 aaKnown RBP12.04□□□□□ -0.48
C11orf54-215ENST00000617482 CYP2C9P11712 490 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 MYL4P12829 197 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 COX4I1P13073 169 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 CD68P34810 354 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-215ENST00000617482 CDK7P50613 346 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 PAPOLAP51003 745 aaKnown RBP12.04□□□□□ -0.48
C11orf54-215ENST00000617482 TPI1P60174 286 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 CCNA1P78396 465 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 SV2CQ496J9 727 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 SFT2D3Q587I9 215 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 KIAA0319Q5VV43 1072 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 CLEC20AQ6ZU45 233 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 APLFQ8IW19 511 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-215ENST00000617482 HS6ST3Q8IZP7 471 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 ZNF513Q8N8E2 541 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-215ENST00000617482 TDRD5Q8NAT2 981 aaKnown RBP12.04□□□□□ -0.48
C11orf54-215ENST00000617482 ARRDC4Q8NCT1 418 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 GBP5Q96PP8 586 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 LENG8Q96PV6 779 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-215ENST00000617482 NMRAL1Q9HBL8 299 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 SLC39A10Q9ULF5 831 aa12.04□□□□□ -0.48
C11orf54-215ENST00000617482 DYNC1LI2O43237 492 aaPredicted RBP12.03□□□□□ -0.48
C11orf54-215ENST00000617482 AHCYL1O43865 530 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 TRIM13O60858 407 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 SMIM10L2AP0DMW4 78 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 SMIM10L2BP0DMW5 78 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 PEX2P28328 305 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 PNPLA4P41247 253 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 MAGEA12P43365 314 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 ZBTB17Q13105 803 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 KLF10Q13118 480 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 MPP3Q13368 585 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 ITGA7Q13683 1181 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 DUSP28Q4G0W2 176 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 KCNMB4Q86W47 210 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 FBXW8Q8N3Y1 598 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 GDPD5Q8WTR4 605 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 KCNK16Q96T55 309 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 MLPHQ9BV36 600 aaPredicted RBP12.03□□□□□ -0.48
C11orf54-215ENST00000617482 ULBP1Q9BZM6 244 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 ADAM28Q9UKQ2 775 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 ARHGAP26Q9UNA1 814 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 PLXNA1Q9UIW2 1896 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 AIM2O14862 343 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 NCAM1P13591 858 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 RAG1P15918 1043 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 NFKB1P19838 968 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 GLRBP48167 497 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 AQP4P55087 323 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 FSCBQ5H9T9 825 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 ARMCX6Q7L4S7 300 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms