RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ATE1O95260 518 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 IL1BP01584 269 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 ATP5BP06576 529 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 ARSAP15289 507 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 ACAT1P24752 427 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 SDC4P31431 198 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 EPHX2P34913 555 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 GRIA4P48058 902 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 BCAP31P51572 246 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 BAATQ14032 418 aaPredicted RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 TGFBIQ15582 683 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 RGS21Q2M5E4 152 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 ZIK1Q3SY52 487 aaPredicted RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 PDCD4Q53EL6 469 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 Q6ZNX1 250 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 TMEM110Q86TL2 294 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 PARP8Q8N3A8 854 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 SYTL5Q8TDW5 730 aaPredicted RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 KBTBD7Q8WVZ9 684 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 LGMNQ99538 433 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 OSBPL11Q9BXB4 747 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 CCDC90BQ9GZT6 254 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 SDCBP2Q9H190 292 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 ST6GALNAC4Q9H4F1 302 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 SACM1LQ9NTJ5 587 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 PLK2Q9NYY3 685 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 VPS51Q9UID3 782 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 FAM159BA6NKW6 160 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 A8MU76 341 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 E7ENX8 843 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 H3BNH8 94 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 KCNK1O00180 336 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 TOR1BO14657 336 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 NRP1O14786 923 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 HDAC3O15379 428 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 LDHAP00338 332 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 FUCA1P04066 466 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 TSPAN8P19075 237 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 TFEBP19484 476 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 CYP2F1P24903 491 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 PLK1P53350 603 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 ATXN1P54253 815 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 IFRD2Q12894 506 aaPredicted RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 ITGA7Q13683 1181 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 USP10Q14694 798 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 ZNF423Q2M1K9 1284 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 CCDC14Q49A88 953 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 AARS2Q5JTZ9 985 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 TBCELQ5QJ74 424 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 OTUD3Q5T2D3 398 aaPredicted RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 CCDC80Q76M96 950 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 EEPD1Q7L9B9 569 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 TAS1R3Q7RTX0 852 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 MCF2L2Q86YR7 1114 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 SNX29P2Q8IUI4 249 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 CDKL3Q8IVW4 592 aaPredicted RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 SPNS2Q8IVW8 549 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 CCDC60Q8IWA6 550 aaPredicted RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 SCUBE3Q8IX30 993 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 EXOC8Q8IYI6 725 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 SAMD3Q8N6K7 520 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 COLGALT1Q8NBJ5 622 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 CMASQ8NFW8 434 aaPredicted RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 RP9Q8TA86 221 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 PBXIP1Q96AQ6 731 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 FAM149B1Q96BN6 582 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 PPP1R14BQ96C90 147 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 WNK4Q96J92 1243 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 PIWIL1Q96J94 861 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 NLRP4Q96MN2 994 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 AGAP2Q99490 1192 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 FRMD8P1Q9BZ68 369 aaPredicted RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 ING2Q9H160 280 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 DHX33Q9H6R0 707 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 NMRAL1Q9HBL8 299 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 PCDH12Q9NPG4 1184 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 UBP1Q9NZI7 540 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 GMPR2Q9P2T1 348 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 MYH14Q7Z406 1995 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 HEATR9A2RTY3 570 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 BCL10O95999 233 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 ASS1P00966 412 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 PSAPP07602 524 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 HNRNPLP14866 589 aaKnown RBP eCLIP6.8□□□□□ -1.32
LMO3-235ENST00000616247 ZNF24P17028 368 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 SFNP31947 248 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 GP5P40197 560 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 DPP6P42658 865 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 RPL14P50914 215 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 EN1Q05925 392 aaPredicted RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 SPIDRQ14159 915 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 KIF19Q2TAC6 998 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 ZNF618Q5T7W0 954 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 EPGNQ6UW88 154 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 C15orf39Q6ZRI6 1047 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 KDELC2Q7Z4H8 507 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 XYLT1Q86Y38 959 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 CDAN1Q8IWY9 1227 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 RAVER1Q8IY67 606 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 PGAM4Q8N0Y7 254 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms