RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 TLCD1Q96CP7 247 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 TBCDQ9BTW9 1192 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 RAP2CQ9Y3L5 183 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 ANKRD63C9JTQ0 380 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 CCR1P32246 355 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 RPS6KA3P51812 740 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 NDUFA5Q16718 116 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 TTC30AQ86WT1 665 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 FAM47BQ8NA70 645 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 WDR36Q8NI36 951 aaKnown RBP19.16■□□□□ 0.66
SPAST-203ENST00000615843 PURBQ96QR8 312 aaKnown RBP19.16■□□□□ 0.66
SPAST-203ENST00000615843 CCNT2O60583 730 aaKnown RBP19.16■□□□□ 0.66
SPAST-203ENST00000615843 ANXA11P50995 505 aaKnown RBP19.16■□□□□ 0.66
SPAST-203ENST00000615843 CRADDP78560 199 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 KLHL12Q53G59 568 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 C11orf96Q7Z7L8 435 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 HPS1Q92902 700 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 CLCA2Q9UQC9 943 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 DPYSL4O14531 572 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 SIX5Q8N196 739 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 TSEN34Q9BSV6 310 aaKnown RBP19.16■□□□□ 0.66
SPAST-203ENST00000615843 INVSQ9Y283 1065 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 TCRBV9S1A1TA0A576 114 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 DDX3YO15523 660 aaKnown RBP19.16■□□□□ 0.66
SPAST-203ENST00000615843 MAGEC1O60732 1142 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 VCLP18206 1134 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 DNAJB2P25686 324 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 TKTL1P51854 596 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 C1orf186Q6ZWK4 172 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 CERS2Q96G23 380 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 CLPTM1LQ96KA5 538 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 TEKT5Q96M29 485 aa19.16■□□□□ 0.66
SPAST-203ENST00000615843 MYL12BO14950 172 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 EPHA3P29320 983 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 SPIRE1Q08AE8 756 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 SAPCD2Q86UD0 394 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 LINC00116Q8NCU8 138 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 ZHX1-C8orf76Q96EF9 292 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 OSBPL10Q9BXB5 764 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 PPRC1Q5VV67 1664 aaKnown RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 LTFP02788 710 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 FESP07332 822 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 TAL1P17542 331 aaPredicted RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 ILF2Q12905 390 aaKnown RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 C11orf88Q6PI97 169 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 ARMCX6Q7L4S7 300 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 PALB2Q86YC2 1186 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 TMEM132CQ8N3T6 1108 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 FAM45AQ8TCE6 357 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 CENPIQ92674 756 aaPredicted RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 RTKNQ9BST9 563 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 KRCC1Q9NPI7 259 aaPredicted RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 C3orf18Q9UK00 162 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 CYB561D2O14569 222 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 SEC22BO75396 215 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 ODC1P11926 461 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 ITGALP20701 1170 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 HALP42357 657 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 ITPK1Q13572 414 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 SPIDRQ14159 915 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 SLC1A5Q15758 541 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 FOXR2Q6PJQ5 311 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 SCUBE3Q8IX30 993 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 CYP4Z2PQ8N1L4 340 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 TBL1YQ9BQ87 522 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 TMEM109Q9BVC6 243 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 WDR12Q9GZL7 423 aaKnown RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 ADPRHL2Q9NX46 363 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 ABI2Q9NYB9 513 aaPredicted RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 CRNNQ9UBG3 495 aaPredicted RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 hCG_1818297A0A087WSY0 165 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 SIGLEC16A6NMB1 481 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 RECQL5O94762 991 aaPredicted RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 DBTP11182 482 aaKnown RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 GPC1P35052 558 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 RXRGP48443 463 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 BNIP2Q12982 314 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 ZNF177Q13360 481 aaPredicted RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 INO80DQ53TQ3 878 aaPredicted RBP19.15■□□□□ 0.66
SPAST-203ENST00000615843 HGSNATQ68CP4 663 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 EPHX4Q8IUS5 362 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 SHC3Q92529 594 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 ZFP42Q96MM3 310 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 LRRC4CQ9HCJ2 640 aa19.15■□□□□ 0.66
SPAST-203ENST00000615843 A0A0A0MRY4 1105 aa19.14■□□□□ 0.66
SPAST-203ENST00000615843 DHRS12A0PJE2 317 aa19.14■□□□□ 0.66
SPAST-203ENST00000615843 IL12AP29459 219 aa19.14■□□□□ 0.66
SPAST-203ENST00000615843 SLC6A3Q01959 620 aa19.14■□□□□ 0.66
SPAST-203ENST00000615843 GALNT15Q8N3T1 639 aa19.14■□□□□ 0.66
SPAST-203ENST00000615843 SPATA13Q96N96 652 aa19.14■□□□□ 0.66
SPAST-203ENST00000615843 REEP1Q9H902 201 aa19.14■□□□□ 0.66
SPAST-203ENST00000615843 TAS2R13Q9NYV9 303 aa19.14■□□□□ 0.66
SPAST-203ENST00000615843 ITGA11Q9UKX5 1188 aa19.14■□□□□ 0.66
SPAST-203ENST00000615843 HIRAP54198 1017 aaPredicted RBP19.14■□□□□ 0.65
SPAST-203ENST00000615843 GPR162Q16538 588 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 KHDC1Q4VXA5 237 aaKnown RBP19.14■□□□□ 0.65
SPAST-203ENST00000615843 UNC5AQ6ZN44 842 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 SAMD3Q8N6K7 520 aa19.14■□□□□ 0.65
SPAST-203ENST00000615843 KLHL31Q9H511 634 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms