RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 V9GYQ6 96 aa14.09□□□□□ -0.15
HPS1-215ENST00000613394 ATP6AP2A0A1C7CYW4 349 aa14.08□□□□□ -0.15
HPS1-215ENST00000613394 TSPAN1O60635 241 aa14.08□□□□□ -0.15
HPS1-215ENST00000613394 ATP6AP2O75787 350 aa14.08□□□□□ -0.15
HPS1-215ENST00000613394 SLC25A27O95847 323 aa14.08□□□□□ -0.15
HPS1-215ENST00000613394 ACADSBP45954 432 aa14.08□□□□□ -0.15
HPS1-215ENST00000613394 ZNF280AP59817 542 aaPredicted RBP14.08□□□□□ -0.15
HPS1-215ENST00000613394 GRTP1Q5TC63 336 aa14.08□□□□□ -0.15
HPS1-215ENST00000613394 ITPRIPL1Q6GPH6 555 aa14.08□□□□□ -0.15
HPS1-215ENST00000613394 AFAP1L2Q8N4X5 818 aa14.08□□□□□ -0.15
HPS1-215ENST00000613394 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.08□□□□□ -0.15
HPS1-215ENST00000613394 ZMAT2Q96NC0 199 aaKnown RBP14.08□□□□□ -0.15
HPS1-215ENST00000613394 USP2O75604 605 aaPredicted RBP14.08□□□□□ -0.16
HPS1-215ENST00000613394 CTSHP09668 335 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 UQCRBP14927 111 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 ITGAXP20702 1163 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 SLC26A2P50443 739 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 SLC12A1Q13621 1099 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 CNPY1Q3B7I2 92 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 ARL13AQ5H913 290 aaPredicted RBP14.08□□□□□ -0.16
HPS1-215ENST00000613394 WSCD1Q658N2 575 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 NOTUMQ6P988 496 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 MYLK4Q86YV6 388 aaPredicted RBP14.08□□□□□ -0.16
HPS1-215ENST00000613394 FBXW8Q8N3Y1 598 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 HASPINQ8TF76 798 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 ZNF560Q96MR9 790 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 MRPL1Q9BYD6 325 aaKnown RBP14.08□□□□□ -0.16
HPS1-215ENST00000613394 WDCPQ9H6R7 721 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 RHBDL2Q9NX52 303 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 UBQLN1Q9UMX0 589 aaKnown RBP14.08□□□□□ -0.16
HPS1-215ENST00000613394 COL2A1P02458 1487 aaPredicted RBP14.08□□□□□ -0.16
HPS1-215ENST00000613394 DOCK5Q9H7D0 1870 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 C15orf38-AP3S2A0A0A6YYH1 394 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 CAPN14A8MX76 684 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 ABLIM1O14639 778 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 PTK2BQ14289 1009 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 GSTA3Q16772 222 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 OR52E8Q6IFG1 317 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 LRRC8BQ6P9F7 803 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 OTOP3Q7RTS5 596 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 ARPINQ7Z6K5 226 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 SPNS2Q8IVW8 549 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 DNAJB3Q8WWF6 145 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 JADE3Q92613 823 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 APBB2Q92870 758 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 TRAPPC9Q96Q05 1148 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 EPAS1Q99814 870 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 CDH19Q9H159 772 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 PNPLA8Q9NP80 782 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 SIPA1L1O43166 1804 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 UBR3Q6ZT12 1888 aa14.08□□□□□ -0.16
HPS1-215ENST00000613394 IGKV6D-21A0A0A0MT36 114 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 HMX2A2RU54 273 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 FAM200BP0CF97 657 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 SETSIPP0DME0 302 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 SEMA5AQ13591 1074 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 R3HDM1Q15032 1099 aaKnown RBP14.07□□□□□ -0.16
HPS1-215ENST00000613394 AGKQ53H12 422 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 TEX44Q53QW1 395 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 B4GALNT2Q8NHY0 566 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 C12orf42Q96LP6 360 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 WDR41Q9HAD4 459 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 EFCAB1Q9HAE3 211 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 PTPRHQ9HD43 1115 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 MORF4L1Q9UBU8 362 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 ACOT9Q9Y305 439 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 PCNTO95613 3336 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 TAF1LQ8IZX4 1826 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 TMEM233B4DJY2 109 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 YBX3P16989 372 aaKnown RBP eCLIP14.07□□□□□ -0.163e-7■■□□□ 14.1
HPS1-215ENST00000613394 MATKP42679 507 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 CHN2P52757 468 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 CCDC153Q494R4 210 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 ANKRD20A4Q4UJ75 823 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 C6orf52Q5T4I8 152 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 HFE2Q6ZVN8 426 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 PSTKQ8IV42 348 aaKnown RBP14.07□□□□□ -0.16
HPS1-215ENST00000613394 PNPLA1Q8N8W4 532 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 SPATA22Q8NHS9 363 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 SLC35F5Q8WV83 523 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 ZBED3Q96IU2 234 aaPredicted RBP14.07□□□□□ -0.16
HPS1-215ENST00000613394 NDNQ99608 321 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 FAF1Q9UNN5 650 aaPredicted RBP14.07□□□□□ -0.16
HPS1-215ENST00000613394 EVPLQ92817 2033 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 AKAP10O43572 662 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 TIMM44O43615 452 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 PFKMP08237 780 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 STX1BP61266 288 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 GRM3Q14832 879 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 DPYSL2Q16555 572 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 HSF5Q4G112 596 aaPredicted RBP14.07□□□□□ -0.16
HPS1-215ENST00000613394 SPANXN3Q5MJ09 141 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 RBM44Q6ZP01 1051 aaKnown RBP14.07□□□□□ -0.16
HPS1-215ENST00000613394 SCN4BQ8IWT1 228 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 PQLC1Q8N2U9 271 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 ACMSDQ8TDX5 336 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 FICDQ9BVA6 458 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 XPR1Q9UBH6 696 aa14.07□□□□□ -0.16
HPS1-215ENST00000613394 NEMP2A6NFY4 417 aa14.06□□□□□ -0.16
HPS1-215ENST00000613394 MYL3P08590 195 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms