RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 ARHGEF7Q14155 803 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 CYP1B1Q16678 543 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 TTMPQ5BVD1 217 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 VSTM1Q6UX27 236 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 LPCAT2Q7L5N7 544 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 ST13P5Q8NFI4 369 aaPredicted RBP8.89□□□□□ -0.99
PDE6A-204ENST00000613228 BRI3BPQ8WY22 251 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 MYLPFQ96A32 169 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 TMEM109Q9BVC6 243 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 CHST7Q9NS84 486 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 RAD18Q9NS91 495 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 ARHGAP26Q9UNA1 814 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 DTNAQ9Y4J8 743 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 ORC6Q9Y5N6 252 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 CSDE1O75534 798 aaKnown RBP8.89□□□□□ -0.99
PDE6A-204ENST00000613228 SOAT2O75908 522 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 SELPP16109 830 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 GP5P40197 560 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 TTLL9Q3SXZ7 439 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 SLC39A12Q504Y0 691 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 RNF220Q5VTB9 566 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 FAM171A1Q5VUB5 890 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 CXCL17Q6UXB2 119 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 MAMDC4Q6UXC1 1216 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 ADCK1Q86TW2 530 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 FAM35AQ86V20 835 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 PALB2Q86YC2 1186 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 ULK4Q96C45 1275 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 MRPS26Q9BYN8 205 aaKnown RBP8.89□□□□□ -0.99
PDE6A-204ENST00000613228 SYTL2Q9HCH5 934 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 CNTN3Q9P232 1028 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 NAALADL1Q9UQQ1 740 aa8.89□□□□□ -0.99
PDE6A-204ENST00000613228 PTPRJQ12913 1337 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 F5H423 210 aaPredicted RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 TAF4O00268 1085 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 TNFAIP8O95379 198 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 UNGP13051 313 aaPredicted RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 ATP6V1B1P15313 513 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 PPM1AP35813 382 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 MAPK8P45983 427 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 POLD2P49005 469 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 C15orf59Q2T9L4 293 aaPredicted RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 C1orf127Q8N9H9 656 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 HIPK4Q8NE63 616 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 ACMSDQ8TDX5 336 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 PRCCQ92733 491 aaPredicted RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 FOPNLQ96NB1 174 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 MRPL45Q9BRJ2 306 aaKnown RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 FICDQ9BVA6 458 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 RIC8BQ9NVN3 520 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 RNF103O00237 685 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 RAMP2O60895 175 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 UPP2O95045 317 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 MLNP12872 115 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 TPSB2P20231 275 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 ABL2P42684 1182 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 PTDSS1P48651 473 aaKnown RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 MRPL28Q13084 256 aaKnown RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 SLC12A1Q13621 1099 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 TPSAB1Q15661 275 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 IMPG1Q17R60 797 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 PRAMEF19Q5SWL8 479 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 MARC1Q5VT66 337 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 KYAT3Q6YP21 454 aaKnown RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 SLC26A9Q7LBE3 791 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 SCUBE1Q8IWY4 988 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 NUP93Q8N1F7 819 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 GIPC3Q8TF64 312 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 NKD2Q969F2 451 aaPredicted RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 DGCR14Q96DF8 476 aaKnown RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 BORCS6Q96GS4 357 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 YME1L1Q96TA2 773 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 SNRNP25Q9BV90 132 aaKnown RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 IL22Q9GZX6 179 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 PAIP1Q9H074 479 aaKnown RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 SEMA4AQ9H3S1 761 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 PHTF1Q9UMS5 762 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 GPC6Q9Y625 555 aaPredicted RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 IGKV6D-21A0A0A0MT36 114 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 BCLAF3A2AJT9 711 aaKnown RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 VNN1O95497 513 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 ALOX5P09917 674 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 IRF1P10914 325 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 SPIDRQ14159 915 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 TBC1D19Q8N5T2 526 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 SLCO2A1Q92959 643 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 KCNK16Q96T55 309 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 ACBD6Q9BR61 282 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 POLE3Q9NRF9 147 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 TMEM39AQ9NV64 488 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 FAM153AQ9UHL3 310 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 DMTF1Q9Y222 760 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 A0A0U1RQJ8 604 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 SNTNA6NMZ2 147 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 HIST1H2AGP0C0S8 130 aaPredicted RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 YBX3P16989 372 aaKnown RBP eCLIP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 HIST1H2ADP20671 130 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 TUBP50607 506 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 TARBP2Q15633 366 aaKnown RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 CHI3L2Q15782 390 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms