RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 PRPF4O43172 522 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 OR5F1O95221 314 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PSKH1P11801 424 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PSME3P61289 254 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 FRG1Q14331 258 aaKnown RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PUM3Q15397 648 aaKnown RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 DUPD1Q68J44 220 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 RBM15BQ8NDT2 890 aaKnown RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 NXNL1Q96CM4 212 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 MSANTD3Q96H12 275 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 FAM86C1Q9NVL1 165 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 CHORDC1Q9UHD1 332 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 KIAA1024Q9UPX6 916 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PNPLA7Q6ZV29 1317 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PI4K2BG5E9Z4 385 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PTTG1O95997 202 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 RXRGP48443 463 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 SLC12A1Q13621 1099 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PLA2G4EQ3MJ16 856 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 LMBR1LQ6UX01 489 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 OTOAQ7RTW8 1153 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 C12orf66Q96MD2 445 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 NOL11Q9H8H0 719 aaKnown RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 UBQLN2Q9UHD9 624 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 CPNE3O75131 537 aaKnown RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 SOAT2O75908 522 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 SLC1A6P48664 564 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PTPN5P54829 565 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 GALEQ14376 348 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 DDI2Q5TDH0 399 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 FAM91A1Q658Y4 838 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PPM1KQ8N3J5 372 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 MTMR12Q9C0I1 747 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 DNAJC16Q9Y2G8 782 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 WDR64B1ANS9 1081 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 DDX3YO15523 660 aaKnown RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PEX2P28328 305 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 HIRAP54198 1017 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 SELPLGQ14242 412 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PTF1AQ7RTS3 328 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PHF12Q96QT6 1004 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 SEMA6AQ9H2E6 1030 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 KANSL2Q9H9L4 492 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 ALOX15BO15296 676 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 FDPSP14324 419 aaKnown RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PPP3CCP48454 512 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 ANO4Q32M45 955 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 TRMT1LQ7Z2T5 733 aaKnown RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 C10orf107Q8IVU9 208 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 CACTIN-AS1Q8N1I8 211 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.03□□□□□ -1.62e-7■■■■■ 62.8
VPS13D-213ENST00000613099 TMEM206Q9H813 350 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 KCNK13Q9HB14 408 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 ANAPC2Q9UJX6 822 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 SLC13A4Q9UKG4 626 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 COL15A1P39059 1388 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 ATP5J2-PTCD1G3V325 749 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PTCD1O75127 700 aaKnown RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 CD6P30203 668 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 FGL2Q14314 439 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 CYP51A1Q16850 503 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 C11orf88Q6PI97 169 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 TOM1L2Q6ZVM7 507 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 SRFBP1Q8NEF9 429 aaKnown RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PPP3R2Q96LZ3 170 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 GRIP1Q9Y3R0 1128 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 HSPB11Q9Y547 144 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PIK3C2AO00443 1686 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 C2orf81A6NN90 581 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 PAHP00439 452 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 UCHL3P15374 230 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 BNIP3Q12983 259 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 LZTR1Q8N653 840 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 OR8K5Q8NH50 307 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 BCL7BQ9BQE9 202 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 NAT9Q9BTE0 207 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 ZNHIT2Q9UHR6 403 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 FKBP9O95302 570 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 APOC1P02654 83 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 C8BP07358 591 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 TFPTP0C1Z6 253 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 KLRC1P26715 233 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 LLGL1Q15334 1064 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 CCNG2Q16589 344 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 EARS2Q5JPH6 523 aaKnown RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 MIB1Q86YT6 1006 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 GSTCDQ8NEC7 633 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 CREB3L1Q96BA8 519 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 DMRTB1Q96MA1 342 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 POLHQ9Y253 713 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 FOXN1O15353 648 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 ATP6V1B2P21281 511 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 SPRP35270 261 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-213ENST00000613099 DEFA5Q01523 94 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 COTL1Q14019 142 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 ATG16L2Q8NAA4 619 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 RDH13Q8NBN7 331 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 ACCSQ96QU6 501 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 ADAMTS10Q9H324 1103 aa5.03□□□□□ -1.6
VPS13D-213ENST00000613099 AURKAO14965 403 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms