RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 DAB1O75553 588 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 ERBB2P04626 1255 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 DRD3P35462 400 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 KRT9P35527 623 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 UBE2HP62256 183 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 SLC6A3Q01959 620 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 CENPCQ03188 943 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 NME3Q13232 169 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.29■□□□□ 0.52
SSBP1-215ENST00000612337 SLC26A9Q7LBE3 791 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 DSG4Q86SJ6 1040 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 MDM1Q8TC05 714 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 FEM1AQ9BSK4 669 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 KDM4CQ9H3R0 1056 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 SIX2Q9NPC8 291 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 FTSJ1Q9UET6 329 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 SLC25A13Q9UJS0 675 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 AJAP1Q9UKB5 411 aaPredicted RBP18.29■□□□□ 0.52
SSBP1-215ENST00000612337 VANGL2Q9ULK5 521 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 HS3ST4Q9Y661 456 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 KNTC1P50748 2209 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 TBC1D3DA0A087WVF3 549 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 TBC1D3IA0A087WXS9 549 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 TBC1D3EA0A087X179 549 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 TBC1D3KA0A087X1G2 549 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-215ENST00000612337 TBC1D3FA6NER0 549 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-215ENST00000612337 TBC1D3LB9A6J9 549 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 FOXN3O00409 490 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-215ENST00000612337 WNT9AO14904 365 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 YKT6O15498 198 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 SLC7A4O43246 635 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 PAGE1O75459 146 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 CLDN11O75508 207 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 TBC1D3HP0C7X1 549 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 NOS2P35228 1153 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 CLCN1P35523 988 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 MTIF2P46199 727 aaKnown RBP18.28■□□□□ 0.52
SSBP1-215ENST00000612337 IRAK1P51617 712 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 ZNF177Q13360 481 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-215ENST00000612337 SMAD1Q15797 465 aaKnown RBP18.28■□□□□ 0.52
SSBP1-215ENST00000612337 C5orf22Q49AR2 442 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 PTPN20Q4JDL3 420 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 PRAMEF14Q5SWL7 426 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 FAM46CQ5VWP2 391 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 TBC1D3GQ6DHY5 549 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 TBC1D3CQ6IPX1 549 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 SLC47A2Q86VL8 602 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 TBC1D3Q8IZP1 549 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-215ENST00000612337 MLKLQ8NB16 471 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 ZNF397Q8NF99 534 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-215ENST00000612337 OR52K2Q8NGK3 314 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 OR8D1Q8WZ84 308 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 SERAC1Q96JX3 654 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 SYNCQ9H7C4 482 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 GDF3Q9NR23 364 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 DKK4Q9UBT3 224 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 DNAJC12Q9UKB3 198 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 GPSM3Q9Y4H4 160 aa18.28■□□□□ 0.52
SSBP1-215ENST00000612337 M0QYT0 321 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 ALOX15BO15296 676 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 METAP1P53582 386 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 PPP2CBP62714 309 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 PPP2CAP67775 309 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 SHBQ15464 509 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 DLG2Q15700 870 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 MAN2A1Q16706 1144 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 ACCSLQ4AC99 568 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 SLC45A4Q5BKX6 768 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 C14orf80Q86SX3 495 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 GATAD2AQ86YP4 633 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 ZDHHC17Q8IUH5 632 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 SAP25Q8TEE9 199 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 RRN3Q9NYV6 651 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 VPS28Q9UK41 221 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 SARDHQ9UL12 918 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 TBC1D30Q9Y2I9 924 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 OR51B4Q9Y5P0 310 aa18.27■□□□□ 0.52
SSBP1-215ENST00000612337 ADAMTS20P59510 1910 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 TLR4O00206 839 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 PLK4O00444 970 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 PLRG1O43660 514 aaKnown RBP18.26■□□□□ 0.51
SSBP1-215ENST00000612337 ITGAVP06756 1048 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 NUDT1P36639 197 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 GGCXP38435 758 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 CDH4P55283 916 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 NXPH1P58417 271 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 BPIFB4P59827 614 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 TPD52L1Q16890 204 aaPredicted RBP18.26■□□□□ 0.51
SSBP1-215ENST00000612337 OTUD1Q5VV17 481 aaPredicted RBP18.26■□□□□ 0.51
SSBP1-215ENST00000612337 NAPEPLDQ6IQ20 393 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 PRPF39Q86UA1 669 aaKnown RBP18.26■□□□□ 0.51
SSBP1-215ENST00000612337 MARCH9Q86YJ5 346 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 FAM71AQ8IYT1 594 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 SH2D3CQ8N5H7 860 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 NPY6RQ99463 290 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 SIK2Q9H0K1 926 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 ERVMER34-1Q9H9K5 563 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 PIGVQ9NUD9 493 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 ARHGEF38Q9NXL2 777 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms