RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 DNMT3BQ9UBC3 853 aaKnown RBP8.31□□□□□ -1.08
TARDBP-213ENST00000611963 HCFC2Q9Y5Z7 792 aa8.31□□□□□ -1.08
TARDBP-213ENST00000611963 CPQQ9Y646 472 aa8.31□□□□□ -1.08
TARDBP-213ENST00000611963 ANKRD36A6QL64 1941 aa8.31□□□□□ -1.08
TARDBP-213ENST00000611963 IGLV3-10A0A075B6K4 115 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 TRAV19A0A0A6YYK7 116 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 CFAP69A5D8W1 941 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 WASH4PA8MWX3 477 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 F5H423 210 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 F5H5T6 163 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 RNF103O00237 685 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 DFFAO00273 331 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 DNALI1O14645 258 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 PPP1R12AO14974 1030 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 MBTPS2O43462 519 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 TSPAN3O60637 253 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 XYLBO75191 536 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 MOSPD3O75425 235 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 SASH3O75995 380 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 OLFM2O95897 454 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 CKMP06732 381 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 HNRNPA1P09651 372 aaKnown RBP eCLIP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 HDCP19113 662 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 HOXA9P31269 272 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 SERPINB6P35237 376 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 CHKAP35790 457 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 SLC11A2P49281 568 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 EPHA5P54756 1037 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 KCNC4Q03721 635 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 GALNT2Q10471 571 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 CALCOCO2Q13137 446 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 TEAD2Q15562 447 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 SLC5A9Q2M3M2 681 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 GPR158Q5T848 1215 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 FAXCQ5TGI0 409 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 ANKRD22Q5VYY1 191 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 HEATR6Q6AI08 1181 aaKnown RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 EMBQ6PCB8 327 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 RHBDF2Q6PJF5 856 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 BZW1Q7L1Q6 419 aaKnown RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 CCDC25Q86WR0 208 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 CFAP52Q8N1V2 620 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 EIF1ADQ8N9N8 165 aaKnown RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 CCNYQ8ND76 341 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 CCHCR1Q8TD31 782 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 CAVIN3Q969G5 261 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 ZNF707Q96C28 371 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 LRRC45Q96CN5 670 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 RTP4Q96DX8 246 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 PRICKLE1Q96MT3 831 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 RPRD1AQ96P16 312 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 REPIN1Q9BWE0 567 aaKnown RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 CEP41Q9BYV8 373 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 PRKD2Q9BZL6 878 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 ZYG11BQ9C0D3 744 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 SMG9Q9H0W8 520 aaKnown RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 NOL6Q9H6R4 1146 aaKnown RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 ANAPC5Q9UJX4 755 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 AGO1Q9UL18 857 aaKnown RBP8.3□□□□□ -1.08
TARDBP-213ENST00000611963 BDP1A6H8Y1 2624 aa8.3□□□□□ -1.08
TARDBP-213ENST00000611963 MYLKQ15746 1914 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 A0A0A0MRY4 1105 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 CCDC195A0A1B0GUA6 201 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 TCRBV7S3A2A0A539 114 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 DRGXA6NNA5 263 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 KCNK1O00180 336 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 RHOQP17081 205 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 CEBPBP17676 345 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 PTPN2P17706 415 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 ITIH2P19823 946 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 STIP1P31948 543 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 GARSP41250 739 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 NUMBP49757 651 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 RPS24P62847 133 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 BASP1P80723 227 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 SLC7A9P82251 487 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 GAD2Q05329 585 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 ZP2Q05996 745 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 PPIDQ08752 370 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 WASHC5Q12768 1159 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 SMAD4Q13485 552 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 CASP8Q14790 479 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 SMAD2Q15796 467 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 SYCP2LQ5T4T6 812 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 UBAP2Q5T6F2 1119 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 RNASEH2BQ5TBB1 312 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 AFMIDQ63HM1 303 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 HIBCHQ6NVY1 386 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 RTL10Q7L3V2 364 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 HDXQ7Z353 690 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 GRASPQ7Z6J2 395 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 GJD3Q8N144 294 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 ATPAF2Q8N5M1 289 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 SMRP1Q8NCR6 262 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 USP33Q8TEY7 942 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 HTR3CQ8WXA8 447 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 ING5Q8WYH8 240 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 CPT1BQ92523 772 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 SMG7Q92540 1137 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 PPP2R3CQ969Q6 453 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms