RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 RHOCP08134 193 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 RBP3P10745 1247 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 ADH5P11766 374 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 TYRP14679 529 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 GDI1P31150 447 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 ETFBP38117 255 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 GARSP41250 739 aaKnown RBP16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 PLK1P53350 603 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 EIF3EP60228 445 aaKnown RBP16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 GNA12Q03113 381 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 SLC12A1Q13621 1099 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 RUNX3Q13761 415 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 BYSLQ13895 437 aaKnown RBP16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 POLD3Q15054 466 aaPredicted RBP16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 GAB4Q2WGN9 574 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 ANO4Q32M45 955 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 MFN1Q8IWA4 741 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 CCDC117Q8IWD4 279 aaPredicted RBP16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 TP53INP2Q8IXH6 220 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 CARNMT1Q8N4J0 409 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 CPA6Q8N4T0 437 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 MMGT1Q8N4V1 131 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 OR52K2Q8NGK3 314 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 ATL2Q8NHH9 583 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 ATG4AQ8WYN0 398 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 ARHGEF2Q92974 986 aaKnown RBP16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 FATE1Q969F0 183 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 HDAC11Q96DB2 347 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 ALG14Q96F25 216 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 CELF6Q96J87 481 aaKnown RBP16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 RUNDC3BQ96NL0 473 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 ACE2Q9BYF1 805 aaPredicted RBP16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 KCNK12Q9HB15 430 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 PLK2Q9NYY3 685 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 PRKAG3Q9UGI9 489 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 LIMD1Q9UGP4 676 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 PCYOX1Q9UHG3 505 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 FEZ2Q9UHY8 353 aaPredicted RBP16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 CLEC4EQ9ULY5 219 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 OR51B4Q9Y5P0 310 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 ZNF318Q5VUA4 2279 aa16.36■□□□□ 0.21
CLTCL1-207ENST00000611723 MYO10Q9HD67 2058 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 OTOL1A6NHN0 477 aaPredicted RBP16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 PPP1R12AO14974 1030 aaPredicted RBP16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 CACNG3O60359 315 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 ITGAVP06756 1048 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 CISD3P0C7P0 127 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 SP100P23497 879 aaPredicted RBP16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 CCNCP24863 283 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 STIP1P31948 543 aaKnown RBP16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 PAPOLAP51003 745 aaKnown RBP16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 PPIDQ08752 370 aaKnown RBP16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 CDH18Q13634 790 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 PRKD1Q15139 912 aaPredicted RBP16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 SLC45A4Q5BKX6 768 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 FSCBQ5H9T9 825 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 TTC27Q6P3X3 843 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 KIAA0907Q7Z7F0 614 aaPredicted RBP16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 ETFBKMTQ8IXQ9 262 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 SLC44A3Q8N4M1 653 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 WFDC5Q8TCV5 224 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 RSAD2Q8WXG1 361 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 SLCO2A1Q92959 643 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 HMCESQ96FZ2 354 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 XPO6Q96QU8 1125 aaKnown RBP16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 USP29Q9HBJ7 922 aa16.35■□□□□ 0.21
CLTCL1-207ENST00000611723 A0A0D9SEW6 157 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 CXorf51AA0A1B0GTR3 108 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 CFAP69A5D8W1 941 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 H7C0C1 242 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 DCXO43602 365 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 MAFKO60675 156 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 MAP3K6O95382 1288 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 SLU7O95391 586 aaKnown RBP16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 ALADP13716 330 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 ACVRL1P37023 503 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 ATP5OP48047 213 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 LMNB2Q03252 620 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 TNK2Q07912 1038 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 SERINC3Q13530 473 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 SNX1Q13596 522 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 ITPRIPL2Q3MIP1 535 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 RNF219Q5W0B1 726 aaPredicted RBP16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 CCDC137Q6PK04 289 aaKnown RBP16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 ZC3H18Q86VM9 953 aaKnown RBP16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 CDKL3Q8IVW4 592 aaPredicted RBP16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 NETO2Q8NC67 525 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 TFB1MQ8WVM0 346 aaKnown RBP16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 BHMTQ93088 406 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 QKIQ96PU8 341 aaKnown RBP eCLIP16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 PHOX2BQ99453 314 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 FAM118BQ9BPY3 351 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 FEM1AQ9BSK4 669 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 DDX47Q9H0S4 455 aaKnown RBP16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 SLC27A6Q9Y2P4 619 aa16.34■□□□□ 0.21
CLTCL1-207ENST00000611723 DFFAO00273 331 aa16.33■□□□□ 0.2
CLTCL1-207ENST00000611723 KDELR3O43731 214 aa16.33■□□□□ 0.2
CLTCL1-207ENST00000611723 MZF1P28698 734 aaPredicted RBP16.33■□□□□ 0.2
CLTCL1-207ENST00000611723 HLA-FP30511 346 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms