RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 NAXDQ8IW45 347 aa22.43■■□□□ 1.18
CBWD3-207ENST00000611426 DEFB106AQ8N104 65 aa22.43■■□□□ 1.18
CBWD3-207ENST00000611426 KDM1BQ8NB78 822 aa22.43■■□□□ 1.18
CBWD3-207ENST00000611426 SPAG5Q96R06 1193 aa22.43■■□□□ 1.18
CBWD3-207ENST00000611426 CPXM1Q96SM3 734 aa22.43■■□□□ 1.18
CBWD3-207ENST00000611426 SGK2Q9HBY8 427 aa22.43■■□□□ 1.18
CBWD3-207ENST00000611426 PCDHGC3Q9UN70 934 aa22.43■■□□□ 1.18
CBWD3-207ENST00000611426 SYNJ2BP-COX16A0A087WUM0 186 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 F5H5T6 163 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 TRIM16O95361 564 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 CER1O95813 267 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 GLI1P08151 1106 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 SRPRAP08240 638 aaKnown RBP22.42■■□□□ 1.18
CBWD3-207ENST00000611426 SLC2A3P11169 496 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 MATKP42679 507 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 CTSOP43234 321 aaPredicted RBP22.42■■□□□ 1.18
CBWD3-207ENST00000611426 CSNK1EP49674 416 aaKnown RBP22.42■■□□□ 1.18
CBWD3-207ENST00000611426 AFF3P51826 1226 aaKnown RBP22.42■■□□□ 1.18
CBWD3-207ENST00000611426 ECT2LQ008S8 904 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 IRF2BP2Q7Z5L9 587 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 RNF34Q969K3 372 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 NOX5Q96PH1 765 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 IL21RQ9HBE5 538 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 COX16Q9P0S2 106 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 DNAJC12Q9UKB3 198 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 SCML1Q9UN30 329 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 ZFHX4Q86UP3 3567 aa22.42■■□□□ 1.18
CBWD3-207ENST00000611426 A0A1B0GVT2 93 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 F8VZ95 297 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 FSBPO95073 299 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 ABCB4P21439 1286 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 STAT1P42224 750 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 KRT83P78385 493 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 BNC1Q01954 994 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 SFSWAPQ12872 951 aaKnown RBP22.41■■□□□ 1.18
CBWD3-207ENST00000611426 EIF4EBP2Q13542 120 aaPredicted RBP22.41■■□□□ 1.18
CBWD3-207ENST00000611426 RAPGEF1Q13905 1077 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 HLA-BQ31612 363 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 RNF219Q5W0B1 726 aaPredicted RBP22.41■■□□□ 1.18
CBWD3-207ENST00000611426 USP30Q70CQ3 517 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 APCDD1Q8J025 514 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 BIRC7Q96CA5 298 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 SLC2A13Q96QE2 648 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 PABPC3Q9H361 631 aaKnown RBP22.41■■□□□ 1.18
CBWD3-207ENST00000611426 ASNSD1Q9NWL6 643 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 DDIT4Q9NX09 232 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 TRMT1Q9NXH9 659 aaKnown RBP22.41■■□□□ 1.18
CBWD3-207ENST00000611426 FBXL12Q9NXK8 326 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 AJAP1Q9UKB5 411 aaPredicted RBP22.41■■□□□ 1.18
CBWD3-207ENST00000611426 REXO2Q9Y3B8 237 aaKnown RBP22.41■■□□□ 1.18
CBWD3-207ENST00000611426 NEUROG3Q9Y4Z2 214 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 SLCO1B1Q9Y6L6 691 aa22.41■■□□□ 1.18
CBWD3-207ENST00000611426 TARSL2A2RTX5 802 aaKnown RBP22.4■■□□□ 1.18
CBWD3-207ENST00000611426 TTC34A8MYJ7 566 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 FOXN3O00409 490 aaPredicted RBP22.4■■□□□ 1.18
CBWD3-207ENST00000611426 HSF2BPO75031 334 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 GRAP2O75791 330 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 GFPT2O94808 682 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 FERP16591 822 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 CCR1P32246 355 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 SNX16P57768 344 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 TEAD4Q15561 434 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 ASIC2Q16515 512 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 ZNF423Q2M1K9 1284 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 C9orf64Q5T6V5 341 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 OR6B2Q6IFH4 312 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 SETD7Q8WTS6 366 aaKnown RBP22.4■■□□□ 1.18
CBWD3-207ENST00000611426 CCDC42Q96M95 316 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 DESI2Q9BSY9 194 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 TM7SF3Q9NS93 570 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 SLCO3A1Q9UIG8 710 aa22.4■■□□□ 1.18
CBWD3-207ENST00000611426 KNL1Q8NG31 2342 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 WDFY3Q8IZQ1 3526 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 EDDM13A0A1B0GTR0 161 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 ZNF883P0CG24 379 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 CD27P26842 260 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 SOX5P35711 763 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 EIF4A3P38919 411 aaKnown RBP22.39■■□□□ 1.18
CBWD3-207ENST00000611426 SLC12A1Q13621 1099 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 CST6Q15828 149 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 RABGAP1LQ5R372 815 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 FAM183BPQ6ZVS7 135 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 SLC47A2Q86VL8 602 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 MMAAQ8IVH4 418 aaKnown RBP22.39■■□□□ 1.18
CBWD3-207ENST00000611426 CHCHD4Q8N4Q1 142 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 C1orf131Q8NDD1 294 aaKnown RBP22.39■■□□□ 1.18
CBWD3-207ENST00000611426 RPL10LQ96L21 214 aaKnown RBP22.39■■□□□ 1.18
CBWD3-207ENST00000611426 PRMT1Q99873 361 aaKnown RBP22.39■■□□□ 1.18
CBWD3-207ENST00000611426 TMEM121BQ9BXQ6 578 aaPredicted RBP22.39■■□□□ 1.18
CBWD3-207ENST00000611426 SYNCQ9H7C4 482 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 TM9SF3Q9HD45 589 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 OSGEPQ9NPF4 335 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 KLK13Q9UKR3 277 aa22.39■■□□□ 1.18
CBWD3-207ENST00000611426 FAM47DPA6NHR8 397 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 MID1O15344 667 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 CCDC172P0C7W6 258 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 IGF2RP11717 2491 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 NNMTP40261 264 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 DRAP1Q14919 205 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-207ENST00000611426 KIF19Q2TAC6 998 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms