RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ZNF69Q9UC07 566 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 IPO11Q9UI26 975 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 SLC8A2Q9UPR5 921 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 WDR17Q8IZU2 1322 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 A6NLC8 198 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 TUBB4AP04350 444 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 CD63P08962 238 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 HNRNPA1P09651 372 aaKnown RBP eCLIP4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 TFEBP19484 476 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 PGM1P36871 562 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 TUBP50607 506 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 MVDP53602 400 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 ARHGAP8P85298 464 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 HSF1Q00613 529 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 ARL13AQ5H913 290 aaPredicted RBP4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 C10orf76Q5T2E6 689 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 SLC30A9Q6PML9 568 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 ZNF66Q6ZN08 573 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 RNF144BQ7Z419 303 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 GALNT7Q86SF2 657 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 PAQR4Q8N4S7 273 aaPredicted RBP4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 FAM110DQ8TAY7 271 aaPredicted RBP4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 UBE2Q2Q8WVN8 375 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 RNFT2Q96EX2 444 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 CTDSP1Q9GZU7 261 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 ACAD9Q9H845 621 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 TXNRD2Q9NNW7 524 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 UBN1Q9NPG3 1134 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 PDGFCQ9NRA1 345 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 CD207Q9UJ71 328 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 FBXO4Q9UKT5 387 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 HSF4Q9ULV5 492 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 TNFSF13BQ9Y275 285 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 DTX4Q9Y2E6 619 aa4.7□□□□□ -1.66
SMCHD1-213ENST00000609587 SLC22A23A1A5C7 686 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 J3KRW8 73 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 EPB41L2O43491 1005 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 PRKCHP24723 683 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 MPGP29372 298 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 PSMC2P35998 433 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 LIFRP42702 1097 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 SLC12A2P55011 1212 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 TBL3Q12788 808 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 RETSATQ6NUM9 610 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 CRELD2Q6UXH1 353 aaPredicted RBP4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 LRRC8DQ7L1W4 858 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 KLBQ86Z14 1044 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 BRSK2Q8IWQ3 736 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 C2CD4CQ8TF44 421 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 NCSTNQ92542 709 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 IP6K1Q92551 441 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 MPP4Q96JB8 637 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 FAM118BQ9BPY3 351 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 UBA5Q9GZZ9 404 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 TAOK3Q9H2K8 898 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 MROH8Q9H579 483 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 TBX20Q9UMR3 447 aa4.69□□□□□ -1.66
SMCHD1-213ENST00000609587 SH2D7A6NKC9 451 aaPredicted RBP4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 C2CD4BA6NLJ0 364 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 KCNJ18B7U540 433 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 PPP6CO00743 305 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 NFATC1O95644 943 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 TYK2P29597 1187 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 DDIT3P35638 169 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 STAT1P42224 750 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 BYSLQ13895 437 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 EZH2Q15910 746 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 NFIL3Q16649 462 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 AP5B1Q2VPB7 878 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 EARS2Q5JPH6 523 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 CEP78Q5JTW2 689 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 MEX3CQ5U5Q3 659 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 NEK8Q86SG6 692 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 ADGRF4Q8IZF3 695 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 GALNT16Q8N428 558 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 ARL14EPQ8N8R7 260 aaPredicted RBP4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 BCAS4Q8TDM0 211 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 ST8SIA4Q92187 359 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 SH3KBP1Q96B97 665 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 CD180Q99467 661 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 SLC26A6Q9BXS9 759 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 CADM1Q9BY67 442 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 IL21RQ9HBE5 538 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 MOV10Q9HCE1 1003 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 TMEM248Q9NWD8 314 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 ALKBH4Q9NXW9 302 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 KLHL13Q9P2N7 655 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 CNOT7Q9UIV1 285 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 ARHGAP26Q9UNA1 814 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 TMEM98Q9Y2Y6 226 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 ZNF804BA4D1E1 1349 aa4.68□□□□□ -1.66
SMCHD1-213ENST00000609587 TCRBV7S3A2A0A539 114 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 CXorf65A6NEN9 183 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 MSI1O43347 362 aaKnown RBP4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 GUCY1B2O75343 617 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 HLA-DQA2P01906 255 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 PRR35P0CG20 571 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 KELP23276 732 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 EPHB2P29323 1055 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms