RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 AASDHPPTQ9NRN7 309 aa21.83■■□□□ 1.09
PPFIA3-209ENST00000602783 PLXNB3Q9ULL4 1909 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 DFNA5O60443 496 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 WNT1P04628 370 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 UCHL3P15374 230 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 CCR5P51681 352 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 OXCT1P55809 520 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 SNX16P57768 344 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 SLC6A3Q01959 620 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 CENPCQ03188 943 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 AUHQ13825 339 aaKnown RBP21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 ELAVL3Q14576 367 aaKnown RBP21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 CDKAL1Q5VV42 579 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 CXorf57Q6NSI4 855 aaKnown RBP21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 SLC26A9Q7LBE3 791 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 PROSER1Q86XN7 944 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 SKA1Q96BD8 255 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 VPS16Q9H269 839 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 VANGL2Q9ULK5 521 aa21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 GOLGA4Q13439 2230 aaKnown RBP21.82■■□□□ 1.08
PPFIA3-209ENST00000602783 TBC1D3DA0A087WVF3 549 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TBC1D3IA0A087WXS9 549 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TBC1D3EA0A087X179 549 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TBC1D3KA0A087X1G2 549 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 FAM170AA1A519 330 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TBC1D3FA6NER0 549 aaPredicted RBP21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TBC1D3LB9A6J9 549 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TNFSF14O43557 240 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TBC1D3HP0C7X1 549 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 CDH5P33151 784 aaPredicted RBP21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 KRT31Q15323 416 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 ACCSLQ4AC99 568 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TAF3Q5VWG9 929 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TBC1D3GQ6DHY5 549 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TBC1D3CQ6IPX1 549 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TMPRSS7Q7RTY8 843 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TBC1D3Q8IZP1 549 aaPredicted RBP21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 TMEM35BQ8NCS4 154 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 FRS2Q8WU20 508 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 SPAG5Q96R06 1193 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 PPP1R9BQ96SB3 815 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 HS3ST4Q9Y661 456 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 PLXNA2O75051 1894 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 CACNA1GO43497 2377 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 FREM2Q5SZK8 3169 aa21.81■■□□□ 1.08
PPFIA3-209ENST00000602783 PTPRBP23467 1997 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 A0A1B0GTQ1 180 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 F8VZ95 297 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 M0QYT0 321 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 WNT9AO14904 365 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 DKK1O94907 266 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 CD38P28907 300 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 NOS2P35228 1153 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 GGCXP38435 758 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 IRAK1P51617 712 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 ADPRHP54922 357 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 ZNF177Q13360 481 aaPredicted RBP21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 CCDC157Q569K6 752 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 OTUD1Q5VV17 481 aaPredicted RBP21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 ZNF397Q8NF99 534 aaPredicted RBP21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 OR52K2Q8NGK3 314 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 ALG14Q96F25 216 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 ELF4Q99607 663 aaPredicted RBP21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 FEM1AQ9BSK4 669 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 SIK2Q9H0K1 926 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 GANQ9H2C0 597 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 CCDC86Q9H6F5 360 aaKnown RBP21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 SLC25A13Q9UJS0 675 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 ZFYVE26Q68DK2 2539 aa21.8■■□□□ 1.08
PPFIA3-209ENST00000602783 C10orf142B7Z368 130 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 GOLGA6L22H0YM25 854 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 PLK4O00444 970 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 PAGE1O75459 146 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 DRD3P35462 400 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 KLK7P49862 253 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 METAP1P53582 386 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 MTA1Q13330 715 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 INAVAQ3KP66 663 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 C14orf80Q86SX3 495 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 NOP9Q86U38 636 aaKnown RBP21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 GATAD2AQ86YP4 633 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 ZDHHC17Q8IUH5 632 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 OR8D1Q8WZ84 308 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 SERAC1Q96JX3 654 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 STK33Q9BYT3 514 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 VPS28Q9UK41 221 aa21.79■■□□□ 1.08
PPFIA3-209ENST00000602783 ANKRD11Q6UB99 2663 aaPredicted RBP21.78■■□□□ 1.08
PPFIA3-209ENST00000602783 A0A1W2PR77 199 aa21.78■■□□□ 1.08
PPFIA3-209ENST00000602783 ATP9BO43861 1147 aa21.78■■□□□ 1.08
PPFIA3-209ENST00000602783 RTN2O75298 545 aa21.78■■□□□ 1.08
PPFIA3-209ENST00000602783 TPM2P07951 284 aa21.78■■□□□ 1.08
PPFIA3-209ENST00000602783 VASPP50552 380 aaPredicted RBP21.78■■□□□ 1.08
PPFIA3-209ENST00000602783 RNASE9P60153 205 aaKnown RBP21.78■■□□□ 1.08
PPFIA3-209ENST00000602783 DLG2Q15700 870 aa21.78■■□□□ 1.08
PPFIA3-209ENST00000602783 SASS6Q6UVJ0 657 aa21.78■■□□□ 1.08
PPFIA3-209ENST00000602783 DSG4Q86SJ6 1040 aa21.78■■□□□ 1.08
PPFIA3-209ENST00000602783 MARCH9Q86YJ5 346 aa21.78■■□□□ 1.08
PPFIA3-209ENST00000602783 MDM1Q8TC05 714 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms