RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PLD2O14939 933 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 CLIC2O15247 247 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 KIF20AO95235 890 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 LIPCP11150 499 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 ASPAP45381 313 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 CYP2J2P51589 502 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 INCA1Q0VD86 236 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 ELAVL3Q14576 367 aaKnown RBP18.21■□□□□ 0.51
SSBP4-207ENST00000600244 NCAPHQ15003 741 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 SGSM1Q2NKQ1 1148 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 RAB41Q5JT25 222 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 PERM1Q5SV97 790 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 RESP18Q5W5W9 173 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 PM20D1Q6GTS8 502 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 RFWD3Q6PCD5 774 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 BHLHA9Q7RTU4 235 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 MFN1Q8IWA4 741 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 SLC22A18ASQ8N1D0 253 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 ZNF507Q8TCN5 953 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 NOX5Q96PH1 765 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 UBXN6Q9BZV1 441 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 SALL4Q9UJQ4 1053 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 ANAPC2Q9UJX6 822 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 C2CD3Q4AC94 2353 aa18.21■□□□□ 0.51
SSBP4-207ENST00000600244 FBN2P35556 2912 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 A0A087X0B3 334 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 GOLGA6L7A0A1B0GV03 622 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 A0A1W2PQ27 194 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 A0A1W2PQ64 194 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 SLC31A1O15431 190 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 CMA1P23946 247 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 SLC6A4P31645 630 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 UGT1A5P35504 534 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 AP3M2P53677 418 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 RIPPLY3P57055 190 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 HNRNPKP61978 463 aaKnown RBP eCLIP18.2■□□□□ 0.5
SSBP4-207ENST00000600244 FAM133BQ5BKY9 247 aaKnown RBP18.2■□□□□ 0.5
SSBP4-207ENST00000600244 ZNF542PQ5EBM4 170 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 MANEAQ5SRI9 462 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 AGBL4Q5VU57 503 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 EPM2AIP1Q7L775 607 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-207ENST00000600244 WDR48Q8TAF3 677 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 CALN1Q9BXU9 219 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 OLA1Q9NTK5 396 aaKnown RBP18.2■□□□□ 0.5
SSBP4-207ENST00000600244 SFMBT1Q9UHJ3 866 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 SARDHQ9UL12 918 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 CSNK1G3Q9Y6M4 447 aa18.2■□□□□ 0.5
SSBP4-207ENST00000600244 EIF3DO15371 548 aaKnown RBP eCLIP18.19■□□□□ 0.5
SSBP4-207ENST00000600244 NVLO15381 856 aaKnown RBP18.19■□□□□ 0.5
SSBP4-207ENST00000600244 CLSTN1O94985 981 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 TAS2R38P59533 333 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 FSCBQ5H9T9 825 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 PITRM1Q5JRX3 1037 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 PPP1R26Q5T8A7 1209 aaPredicted RBP18.19■□□□□ 0.5
SSBP4-207ENST00000600244 MMS22LQ6ZRQ5 1243 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 VASH2Q86V25 355 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 CCDC65Q8IXS2 484 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 FBXO39Q8N4B4 442 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 ZSCAN1Q8NBB4 408 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 ZNF548Q8NEK5 533 aaPredicted RBP18.19■□□□□ 0.5
SSBP4-207ENST00000600244 PARD3BQ8TEW8 1205 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 MYOCQ99972 504 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 NT5C1AQ9BXI3 368 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 STIM2Q9P246 746 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 HPSEQ9Y251 543 aa18.19■□□□□ 0.5
SSBP4-207ENST00000600244 ZFC3H1O60293 1989 aaKnown RBP18.19■□□□□ 0.5
SSBP4-207ENST00000600244 NYNRINQ9P2P1 1898 aaKnown RBP18.18■□□□□ 0.5
SSBP4-207ENST00000600244 LRRIQ3A6PVS8 624 aaPredicted RBP18.18■□□□□ 0.5
SSBP4-207ENST00000600244 NTN3O00634 580 aaPredicted RBP18.18■□□□□ 0.5
SSBP4-207ENST00000600244 IRAK2O43187 625 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 ASS1P00966 412 aaKnown RBP18.18■□□□□ 0.5
SSBP4-207ENST00000600244 RPN1P04843 607 aaKnown RBP18.18■□□□□ 0.5
SSBP4-207ENST00000600244 VAV1P15498 845 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 PRLRP16471 622 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 TRIM21P19474 475 aaKnown RBP18.18■□□□□ 0.5
SSBP4-207ENST00000600244 SNRPFP62306 86 aaKnown RBP18.18■□□□□ 0.5
SSBP4-207ENST00000600244 ECT2LQ008S8 904 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 CNTN1Q12860 1018 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 EIF3IQ13347 325 aaKnown RBP18.18■□□□□ 0.5
SSBP4-207ENST00000600244 DRAP1Q14919 205 aaPredicted RBP18.18■□□□□ 0.5
SSBP4-207ENST00000600244 KMT5BQ4FZB7 885 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 SPOPLQ6IQ16 392 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 RAB11FIP2Q7L804 512 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 ABI3BPQ7Z7G0 1075 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 PIGZQ86VD9 579 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 JAMLQ86YT9 394 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 NDRG1Q92597 394 aaKnown RBP18.18■□□□□ 0.5
SSBP4-207ENST00000600244 TAF4BQ92750 862 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 MYEOVQ96EZ4 313 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 PREBQ9HCU5 417 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 GPR27Q9NS67 375 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 DNAJC28Q9NX36 388 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 TUBD1Q9UJT1 453 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 PLAAQ9Y263 795 aa18.18■□□□□ 0.5
SSBP4-207ENST00000600244 CENPEQ02224 2701 aa18.17■□□□□ 0.5
SSBP4-207ENST00000600244 CSF2P04141 144 aa18.17■□□□□ 0.5
SSBP4-207ENST00000600244 POU3F2P20265 443 aaPredicted RBP18.17■□□□□ 0.5
SSBP4-207ENST00000600244 NR0B2Q15466 257 aa18.17■□□□□ 0.5
SSBP4-207ENST00000600244 E2F4Q16254 413 aa18.17■□□□□ 0.5
SSBP4-207ENST00000600244 GCNT7Q6ZNI0 430 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms