RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 P2RY13Q9BPV8 354 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 IER2Q9BTL4 223 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 CHRDQ9H2X0 955 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 KCND1Q9NSA2 647 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 TMEM248Q9NWD8 314 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 DEC1Q9P2X7 70 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 AMFRQ9UKV5 643 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 TBC1D30Q9Y2I9 924 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 SLC27A6Q9Y2P4 619 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 WASH4PA8MWX3 477 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.36■□□□□ 0.69
CCDC9-205ENST00000600117 H3BRJ5 948 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 MAN2B1O00754 1011 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 KRT1P04264 644 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 KDELR1P24390 212 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 HLA-FP30511 346 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 DGKGP49619 791 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 KDSRQ06136 332 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 MMRN1Q13201 1228 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 DPYSQ14117 519 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 KRT81Q14533 505 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 PDK2Q15119 407 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 PON2Q15165 354 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 HS1BP3Q53T59 392 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 GRAMD4Q6IC98 578 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 FSTL4Q6MZW2 842 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 C1orf228Q6PIY5 440 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 PEX26Q7Z412 305 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 TFAP2DQ7Z6R9 452 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 KATNAL2Q8IYT4 538 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 ZNF687Q8N1G0 1237 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 FAM3CQ92520 227 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 EZH1Q92800 747 aaPredicted RBP19.36■□□□□ 0.69
CCDC9-205ENST00000600117 CSPG4P5Q96PW8 444 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 PNKPQ96T60 521 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 RETREG1Q9H6L5 497 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 SEMA4GQ9NTN9 838 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 NDFIP2Q9NV92 336 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 DDX56Q9NY93 547 aaKnown RBP19.36■□□□□ 0.69
CCDC9-205ENST00000600117 RCOR3Q9P2K3 495 aaPredicted RBP19.36■□□□□ 0.69
CCDC9-205ENST00000600117 PCDHA3Q9Y5H8 950 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 SPEGQ15772 3267 aa19.36■□□□□ 0.69
CCDC9-205ENST00000600117 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.35■□□□□ 0.69
CCDC9-205ENST00000600117 CCDC66A2RUB6 948 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 H0Y626 953 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 FGF10O15520 208 aaPredicted RBP19.35■□□□□ 0.69
CCDC9-205ENST00000600117 CD70P32970 193 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 ARL4AP40617 200 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 PEX5P50542 639 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 LMAN2Q12907 356 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 ZNF177Q13360 481 aaPredicted RBP19.35■□□□□ 0.69
CCDC9-205ENST00000600117 CDH18Q13634 790 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 ANKS1BQ7Z6G8 1248 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 SFTPA1Q8IWL2 248 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 RTL3Q8N8U3 475 aaKnown RBP19.35■□□□□ 0.69
CCDC9-205ENST00000600117 ZNF557Q8N988 423 aaPredicted RBP19.35■□□□□ 0.69
CCDC9-205ENST00000600117 TERB1Q8NA31 727 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 KCTD6Q8NC69 237 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 TRIM58Q8NG06 486 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 ALG3Q92685 438 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 FAF2Q96CS3 445 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 HES6Q96HZ4 224 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 ZNF670Q9BS34 389 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 ARHGEF4Q9NR80 690 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 ABCB8Q9NUT2 735 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 PACSIN2Q9UNF0 486 aaPredicted RBP19.35■□□□□ 0.69
CCDC9-205ENST00000600117 SDK1Q7Z5N4 2213 aa19.35■□□□□ 0.69
CCDC9-205ENST00000600117 A0A0A0MRY4 1105 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 LRRD1A4D1F6 860 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 GOLGA6L9A6NEM1 432 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 DCLK1O15075 740 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 DDX3YO15523 660 aaKnown RBP19.34■□□□□ 0.69
CCDC9-205ENST00000600117 FOXD2O60548 495 aaPredicted RBP19.34■□□□□ 0.69
CCDC9-205ENST00000600117 KAT7O95251 611 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 ERCC2P18074 760 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 AMPD1P23109 780 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 MAPKAPK2P49137 400 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 CSRP2Q16527 193 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 TAZQ16635 292 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 GEN1Q17RS7 908 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 PRR23CQ6ZRP0 262 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 SETD3Q86TU7 594 aaPredicted RBP19.34■□□□□ 0.69
CCDC9-205ENST00000600117 VSIG1Q86XK7 387 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 RNF25Q96BH1 459 aaPredicted RBP19.34■□□□□ 0.69
CCDC9-205ENST00000600117 ALG14Q96F25 216 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 ALS2CR12Q96Q35 445 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 CATSPERBQ9H7T0 1116 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.34■□□□□ 0.69
CCDC9-205ENST00000600117 GGA2Q9UJY4 613 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 ANGPTL2Q9UKU9 493 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 INTS6Q9UL03 887 aaKnown RBP19.34■□□□□ 0.69
CCDC9-205ENST00000600117 OR51B4Q9Y5P0 310 aa19.34■□□□□ 0.69
CCDC9-205ENST00000600117 CHD5Q8TDI0 1954 aa19.33■□□□□ 0.69
CCDC9-205ENST00000600117 IGF2RP11717 2491 aa19.33■□□□□ 0.69
CCDC9-205ENST00000600117 MIF4GDA9UHW6 222 aaKnown RBP19.33■□□□□ 0.68
CCDC9-205ENST00000600117 ZNF487B1APH4 448 aa19.33■□□□□ 0.68
CCDC9-205ENST00000600117 EGFP01133 1207 aa19.33■□□□□ 0.68
CCDC9-205ENST00000600117 APODP05090 189 aa19.33■□□□□ 0.68
CCDC9-205ENST00000600117 CHRM1P11229 460 aaPredicted RBP19.33■□□□□ 0.68
CCDC9-205ENST00000600117 PABPC1P11940 636 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms