RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 OR1E1P30953 314 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 MAPKAPK2P49137 400 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 OXCT1P55809 520 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 MAP7D1Q3KQU3 841 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 ZC3H14Q6PJT7 736 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 CCDC170Q8IYT3 715 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 FRMD1Q8N878 549 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 SLC35G2Q8TBE7 412 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 FAM71BQ8TC56 605 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 GAB3Q8WWW8 586 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 RPL10LQ96L21 214 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 ACE2Q9BYF1 805 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 PRSS16Q9NQE7 514 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 VPS51Q9UID3 782 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 DNAH14Q0VDD8 3507 aa20.01■□□□□ 0.79
SHKBP1-221ENST00000599833 SDK1Q7Z5N4 2213 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 RCCD1A6NED2 376 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 EIF3CLB5ME19 914 aaKnown RBP20■□□□□ 0.79
SHKBP1-221ENST00000599833 MT-CO1P00395 513 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 EPHX1P07099 455 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 RARAP10276 462 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 CNR2P34972 360 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 ACVRL1P37023 503 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 P2RY2P41231 377 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 ARSEP51690 589 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 TAS2R40P59535 323 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 ARF5P84085 180 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 DPYSL2Q16555 572 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 HNRNPA1L2Q32P51 320 aaKnown RBP20■□□□□ 0.79
SHKBP1-221ENST00000599833 FNDC3BQ53EP0 1204 aaKnown RBP20■□□□□ 0.79
SHKBP1-221ENST00000599833 KCNT1Q5JUK3 1230 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 C6orf118Q5T5N4 469 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 C9orf64Q5T6V5 341 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 RWDD4Q6NW29 188 aaKnown RBP20■□□□□ 0.79
SHKBP1-221ENST00000599833 ZNF783Q6ZMS7 281 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 CCDC117Q8IWD4 279 aaPredicted RBP20■□□□□ 0.79
SHKBP1-221ENST00000599833 RTL3Q8N8U3 475 aaKnown RBP20■□□□□ 0.79
SHKBP1-221ENST00000599833 DCAF4L2Q8NA75 395 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 HMGB4Q8WW32 186 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 ATRIPQ8WXE1 791 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 TSC1Q92574 1164 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 PTPRN2Q92932 1015 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 ARHGEF2Q92974 986 aaKnown RBP20■□□□□ 0.79
SHKBP1-221ENST00000599833 EIF3CQ99613 913 aaKnown RBP20■□□□□ 0.79
SHKBP1-221ENST00000599833 DHX35Q9H5Z1 703 aaKnown RBP20■□□□□ 0.79
SHKBP1-221ENST00000599833 CTTNBP2NLQ9P2B4 639 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 PLA2G4CQ9UP65 541 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 HS3ST2Q9Y278 367 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 FAM186AA6NE01 2351 aa20■□□□□ 0.79
SHKBP1-221ENST00000599833 PRR23AA6NEV1 266 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 MYO1FO00160 1098 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 DCLK1O15075 740 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 ATP9BO43861 1147 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 CREB3O43889 395 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 PRPSAP2O60256 369 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 MOCS3O95396 460 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 VAV1P15498 845 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 EPHB2P29323 1055 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 HTR7P34969 479 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 GNA12Q03113 381 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 DPYSQ14117 519 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 SMTNL2Q2TAL5 461 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 SDE2Q6IQ49 451 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 SPC24Q8NBT2 197 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 RFFLQ8WZ73 363 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 VOPP1Q96AW1 172 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 NCAPGQ9BPX3 1015 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 SEMA4AQ9H3S1 761 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 DNAI1Q9UI46 699 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 MBD1Q9UIS9 605 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 VPS28Q9UK41 221 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 EPN1Q9Y6I3 576 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 CEP192Q8TEP8 1941 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 NUMA1Q14980 2115 aa19.99■□□□□ 0.79
SHKBP1-221ENST00000599833 SIN3BO75182 1162 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 ZNF821O75541 412 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 NDUFA10O95299 355 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 SRCP12931 536 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 GOT1P17174 413 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 BCKDHBP21953 392 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 IL4RP24394 825 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 MAN1A1P33908 653 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 HADHBP55084 474 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 SULT2A1Q06520 285 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 E2F5Q15329 346 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 AFMIDQ63HM1 303 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 METTL3Q86U44 580 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 TMTC1Q8IUR5 882 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 SH2D3CQ8N5H7 860 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 TEKT4Q8WW24 435 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 RLN3Q8WXF3 142 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 EPAS1Q99814 870 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 MUC3BQ9H195 1237 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 LRRC19Q9H756 370 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 CWC15Q9P013 229 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 USP36Q9P275 1121 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 SALL4Q9UJQ4 1053 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 PCDHA13Q9Y5I0 950 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 ACTL7AQ9Y615 435 aa19.98■□□□□ 0.79
SHKBP1-221ENST00000599833 THADAQ6YHU6 1953 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms