RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 NUGGCQ68CJ6 796 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 TBC1D3GQ6DHY5 549 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 TBC1D3CQ6IPX1 549 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 DENND1BQ6P3S1 775 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 FBXL19Q6PCT2 694 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 KDM7AQ6ZMT4 941 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 LRRC69Q6ZNQ3 347 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 USP30Q70CQ3 517 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 KANSL1Q7Z3B3 1105 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 TMPRSS12Q86WS5 348 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 UNC45BQ8IWX7 931 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 TBC1D3Q8IZP1 549 aaPredicted RBP8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 TTC39CQ8N584 583 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 TSC1Q92574 1164 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 GOLGA1Q92805 767 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 SLC39A13Q96H72 371 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 FBRSQ9HAH7 460 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 FZD3Q9NPG1 666 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 GDF3Q9NR23 364 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 ARHGAP20Q9P2F6 1191 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 CYTH4Q9UIA0 394 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 PCDHB1Q9Y5F3 818 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 SPG11Q96JI7 2443 aa8.93□□□□□ -0.98
SHKBP1-220ENST00000599716 OTOGQ6ZRI0 2925 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 EDDM13A0A1B0GTR0 161 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 C10orf142B7Z368 130 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 CASC3O15234 703 aaKnown RBP8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 FFAR2O15552 330 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 SIGLEC6O43699 453 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 STX10O60499 249 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 ASLP04424 464 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 GOT1P17174 413 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 TACR2P21452 398 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 FMO5P49326 533 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 ZNF445P59923 1031 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 ECT2LQ008S8 904 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 INSM1Q01101 510 aaPredicted RBP8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 ENPEPQ07075 957 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 E2F5Q15329 346 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 CNGA2Q16280 664 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 INAVAQ3KP66 663 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 MPP7Q5T2T1 576 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 SFMBT2Q5VUG0 894 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 RNF219Q5W0B1 726 aaPredicted RBP8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 SND1Q7KZF4 910 aaKnown RBP eCLIP8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 TMC6Q7Z403 805 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 ENGASEQ8NFI3 743 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 IRGQQ8WZA9 623 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 NXPE2Q96DL1 559 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 KREMEN1Q96MU8 473 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 NT5C1BQ96P26 610 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 UCKL1Q9NWZ5 548 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 ARMCX3Q9UH62 379 aaPredicted RBP8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 ADAMTS1Q9UHI8 967 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 ABCA2Q9BZC7 2435 aa8.92□□□□□ -0.98
SHKBP1-220ENST00000599716 PCNX1Q96RV3 2341 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 ITIH6Q6UXX5 1313 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 TYW5A2RUC4 315 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 E5RJQ4 531 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 E9PAM4 449 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 SLC16A3O15427 465 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 RRP8O43159 456 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 IRAK2O43187 625 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 GRAP2O75791 330 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 PAEPP09466 180 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 KRT5P13647 590 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 C5AR1P21730 350 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 GLDCP23378 1020 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 HNF1BP35680 557 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 GPD2P43304 727 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 CCR5P51681 352 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 YWHAEP62258 255 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 CXADRP78310 365 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 APBA1Q02410 837 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 CNTN1Q12860 1018 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 ACCSLQ4AC99 568 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 ZNF542PQ5EBM4 170 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 NAPEPLDQ6IQ20 393 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 KLHL10Q6JEL2 608 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 CXorf57Q6NSI4 855 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 GJB7Q6PEY0 223 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 Q6ZVU0 165 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 CCAR2Q8N163 923 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 SCML4Q8N228 414 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 SLC25A45Q8N413 288 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 LMO3Q8TAP4 145 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 FRS2Q8WU20 508 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 FAXDC2Q96IV6 333 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 SERPINB11Q96P15 392 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 NOX5Q96PH1 765 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 TSG101Q99816 390 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 OSBPL2Q9H1P3 480 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 METRNQ9UJH8 293 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 FZD4Q9ULV1 537 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 TLR6Q9Y2C9 796 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 PCDHGA1Q9Y5H4 931 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 SNX10Q9Y5X0 201 aa8.91□□□□□ -0.98
SHKBP1-220ENST00000599716 A0A1W2PQ27 194 aa8.9□□□□□ -0.98
SHKBP1-220ENST00000599716 A0A1W2PQ64 194 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms