RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 AP1M1Q9BXS5 423 aa22.4■■□□□ 1.18
LTBP4-224ENST00000599016 SLC39A8Q9C0K1 460 aa22.4■■□□□ 1.18
LTBP4-224ENST00000599016 BRD8Q9H0E9 1235 aa22.4■■□□□ 1.18
LTBP4-224ENST00000599016 DNAJC17Q9NVM6 304 aaKnown RBP22.4■■□□□ 1.18
LTBP4-224ENST00000599016 SAE1Q9UBE0 346 aaPredicted RBP22.4■■□□□ 1.18
LTBP4-224ENST00000599016 SHROOM3Q8TF72 1996 aa22.39■■□□□ 1.18
LTBP4-224ENST00000599016 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.39■■□□□ 1.17
LTBP4-224ENST00000599016 PDE2AO00408 941 aaPredicted RBP22.39■■□□□ 1.17
LTBP4-224ENST00000599016 GJA4P35212 333 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 DGKGP49619 791 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 EIF3EP60228 445 aaKnown RBP22.39■■□□□ 1.17
LTBP4-224ENST00000599016 GALNT2Q10471 571 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 XRCC4Q13426 336 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 SIX1Q15475 284 aaPredicted RBP22.39■■□□□ 1.17
LTBP4-224ENST00000599016 CCNG2Q16589 344 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 PREPLQ4J6C6 727 aaPredicted RBP22.39■■□□□ 1.17
LTBP4-224ENST00000599016 FSCBQ5H9T9 825 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 ATPAF2Q8N5M1 289 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 WFDC5Q8TCV5 224 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 C1orf54Q8WWF1 131 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 ARHGEF2Q92974 986 aaKnown RBP22.39■■□□□ 1.17
LTBP4-224ENST00000599016 NOL6Q9H6R4 1146 aaKnown RBP22.39■■□□□ 1.17
LTBP4-224ENST00000599016 DEC1Q9P2X7 70 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 FBXO10Q9UK96 956 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 CLEC4EQ9ULY5 219 aa22.39■■□□□ 1.17
LTBP4-224ENST00000599016 R3HDM2Q9Y2K5 976 aaKnown RBP22.39■■□□□ 1.17
LTBP4-224ENST00000599016 NYNRINQ9P2P1 1898 aaKnown RBP22.39■■□□□ 1.17
LTBP4-224ENST00000599016 OTOL1A6NHN0 477 aaPredicted RBP22.38■■□□□ 1.17
LTBP4-224ENST00000599016 HACD1B0YJ81 288 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 H7C0C1 242 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 CCDC188H7C350 402 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 ZNF189O75820 626 aaPredicted RBP22.38■■□□□ 1.17
LTBP4-224ENST00000599016 MAP3K6O95382 1288 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 CSKP41240 450 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 ATP5OP48047 213 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 PAPOLAP51003 745 aaKnown RBP22.38■■□□□ 1.17
LTBP4-224ENST00000599016 LMAN2Q12907 356 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 IL31Q6EBC2 164 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 GRAMD4Q6IC98 578 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 CEP112Q8N8E3 955 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 PRELID2Q8N945 189 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 NETO2Q8NC67 525 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 CCNYQ8ND76 341 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 OR7D4Q8NG98 312 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 EXOC4Q96A65 974 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 HMCESQ96FZ2 354 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 OLFM3Q96PB7 478 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 PHOX2BQ99453 314 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 FERMT1Q9BQL6 677 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 SPON2Q9BUD6 331 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 ATP13A1Q9HD20 1204 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 ABCB8Q9NUT2 735 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 GGA2Q9UJY4 613 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 VPS28Q9UK41 221 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 HPCAL4Q9UM19 191 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 KIAA1549LQ6ZVL6 1849 aa22.38■■□□□ 1.17
LTBP4-224ENST00000599016 COL4A3Q01955 1670 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 C19orf67A6NJJ6 358 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 PHF2O75151 1096 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 TULP3O75386 442 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 RBP3P10745 1247 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 SRFP11831 508 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 PABPC1P11940 636 aaKnown RBP22.37■■□□□ 1.17
LTBP4-224ENST00000599016 CD70P32970 193 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 EIF2DP41214 584 aaKnown RBP22.37■■□□□ 1.17
LTBP4-224ENST00000599016 GARSP41250 739 aaKnown RBP22.37■■□□□ 1.17
LTBP4-224ENST00000599016 SERINC3Q13530 473 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 DMC1Q14565 340 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 DARS2Q6PI48 645 aaKnown RBP22.37■■□□□ 1.17
LTBP4-224ENST00000599016 ZC3H18Q86VM9 953 aaKnown RBP22.37■■□□□ 1.17
LTBP4-224ENST00000599016 CDKL3Q8IVW4 592 aaPredicted RBP22.37■■□□□ 1.17
LTBP4-224ENST00000599016 ETFBKMTQ8IXQ9 262 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.37■■□□□ 1.177e-8■■■■□ 21.2
LTBP4-224ENST00000599016 OR52K2Q8NGK3 314 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 WFIKKN2Q8TEU8 576 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 TFB1MQ8WVM0 346 aaKnown RBP22.37■■□□□ 1.17
LTBP4-224ENST00000599016 ATG4AQ8WYN0 398 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 MAGOHBQ96A72 148 aaKnown RBP22.37■■□□□ 1.17
LTBP4-224ENST00000599016 FAM118BQ9BPY3 351 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 FEM1AQ9BSK4 669 aa22.37■■□□□ 1.17
LTBP4-224ENST00000599016 C8orf33Q9H7E9 229 aaPredicted RBP22.37■■□□□ 1.17
LTBP4-224ENST00000599016 A0A0D9SEW6 157 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 LIASO43766 372 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 MZF1P28698 734 aaPredicted RBP22.36■■□□□ 1.17
LTBP4-224ENST00000599016 HLA-FP30511 346 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 ACVRL1P37023 503 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 PLK1P53350 603 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 SNX1Q13596 522 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 BYSLQ13895 437 aaKnown RBP22.36■■□□□ 1.17
LTBP4-224ENST00000599016 GAB4Q2WGN9 574 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 TIGD7Q6NT04 549 aaPredicted RBP22.36■■□□□ 1.17
LTBP4-224ENST00000599016 DRICH1Q6PGQ1 229 aaPredicted RBP22.36■■□□□ 1.17
LTBP4-224ENST00000599016 ZNF572Q7Z3I7 529 aaPredicted RBP22.36■■□□□ 1.17
LTBP4-224ENST00000599016 C12orf40Q86WS4 652 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 TP53INP2Q8IXH6 220 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 AHI1Q8N157 1196 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 CCDC33Q8N5R6 958 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 C12orf50Q8NA57 414 aaPredicted RBP22.36■■□□□ 1.17
LTBP4-224ENST00000599016 SPATA4Q8NEY3 305 aa22.36■■□□□ 1.17
LTBP4-224ENST00000599016 SLC35B2Q8TB61 432 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms